# HG changeset patch # User rliterman # Date 1733936660 18000 # Node ID ee512a230a1e52d6e6dca5846c6bdbc84616d24d # Parent f62b9bcf7cf31cd67d848480d5dfc16aa206fe5f "planemo upload" diff -r f62b9bcf7cf3 -r ee512a230a1e csp2_screen.xml --- a/csp2_screen.xml Fri Dec 06 08:08:22 2024 -0500 +++ b/csp2_screen.xml Wed Dec 11 12:04:20 2024 -0500 @@ -58,6 +58,7 @@ fi; nextflow run ${__tool_directory__}/CSP2/CSP2.nf -profile csp2_galaxy --runmode screen \$QUERY_FASTA_ARG \$REF_FASTA_ARG \$QUERY_READS_ARG \$REF_READS_ARG \$REF_ID_ARG \$TRIM_ARG --readext $readext --forward $forward --reverse $reverse --ref_readext $readext --ref_forward $forward --ref_reverse $reverse --min_cov $min_cov --min_iden $min_iden --min_len $min_len --ref_edge $ref_edge --query_edge $query_edge --dwin $dwin --wsnps $wsnps --out \$CSP2_DIR/CSP2_Screen_Output > Nextflow_Log.txt 2>&1; +sleep 15; ]]>