Contact the administrator of this Tool Shed as soon as possible and let them know that this repository has the following multiple heads which must be merged.
73:c298ec56f92a (2025-03-24)
68:5028fdace37b (2025-03-18)
Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository csp2
Name: csp2
Owner: rliterman
Synopsis: CSP 2
CSP2 is a rapid SNP distance estimation pipeline that works directly from high quality genome assemblies. It can be run in Screening Mode (compare queries to each reference independently) or SNP Pipeline Mode (get pairwise distances between queries based on alignment to each reference). 
Content homepage: https://github.com/CFSAN-Biostatistics/CSP2/tree/main
Development repository: https://github.com/CFSAN-Biostatistics/CSP2/tree/main
Link to this repository: https://toolrepo.galaxytrakr.org/view/rliterman/csp2/c298ec56f92a
Clone this repository: hg clone https://toolrepo.galaxytrakr.org/repos/rliterman/csp2
Type: unrestricted
Revision: 73:c298ec56f92a
This revision can be installed: True
Times cloned / installed: 159

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Screen query assemblies against reference assemblies 0.9.7_Dev21 16.01
Run SNP Pipeline analysis on isolates using one or more references. 0.9.7_Dev21 16.01

Categories
Tool - tools