annotate lexmapr.xml @ 1:9fec74a7e2af

"planemo upload"
author cstrittmatter
date Mon, 27 Jun 2022 17:50:26 -0400
parents f298f3e5c515
children 358c6c7ce174
rev   line source
cstrittmatter@1 1 <tool id="lexmapr2" name="lexmapr2" version="2.1">
cstrittmatter@0 2 <description></description>
cstrittmatter@0 3 <macros>
cstrittmatter@0 4 <import>macros.xml</import>
cstrittmatter@0 5 </macros>
cstrittmatter@0 6 <requirements>
cstrittmatter@0 7 <requirement type="package" version="@TOOL_VERSION@">lexmapr</requirement>
cstrittmatter@0 8 <requirement type="package" version="3">python</requirement>
cstrittmatter@0 9 </requirements>
cstrittmatter@0 10 <version_command>lexmapr --version</version_command>
cstrittmatter@0 11 <command detect_errors="exit_code"><![CDATA[cat ${input} > input.csv && lexmapr2.py ./input.csv > ${output}]]></command>
cstrittmatter@0 12 <inputs>
cstrittmatter@0 13 <param name="input" type="data" format="csv"/>
cstrittmatter@0 14 </inputs>
cstrittmatter@0 15 <outputs>
cstrittmatter@0 16 <data name="output" format="tabular"/>
cstrittmatter@0 17 </outputs>
cstrittmatter@0 18 <tests>
cstrittmatter@0 19 <test>
cstrittmatter@0 20 <param name="input" value="small_simple_input.csv"/>
cstrittmatter@0 21 <output name="output" file="small_simple_output.tsv"/>
cstrittmatter@0 22 </test>
cstrittmatter@0 23 </tests>
cstrittmatter@0 24 <help><![CDATA[
cstrittmatter@0 25 ]]></help>
cstrittmatter@0 26 <citations>
cstrittmatter@0 27 </citations>
cstrittmatter@0 28 </tool>