Mercurial > repos > estrain > data_manager_amrfinderplus

annotate data_manager_conf.xml @ 0:2986b488a62b draft default tip

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author estrain
date Thu, 12 Mar 2026 19:41:57 +0000
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1 <?xml version="1.0"?>
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2 <data_managers>
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3 <data_manager
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4 tool_file="data_manager/data_manager_amrfinderplus.xml"
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5 id="data_manager_amrfinderplus"
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6 tool_data_table_conf="tool_data_table_conf.xml.sample">
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8 <data_table name="amrfinderplus_versioned_database">
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9 <output>
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10 <column name="value" />
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11 <column name="name" />
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12 <column name="path" output_ref="output_file">
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13 <move type="directory" relativize_symlinks="True">
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14 <source>${path}</source>
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15 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">
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16 amrfinderplus-db/${value}
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17 </target>
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18 </move>
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19 <value_translation>
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20 ${GALAXY_DATA_MANAGER_DATA_PATH}/amrfinderplus-db/${value}
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21 </value_translation>
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22 <value_translation type="function">abspath</value_translation>
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23 </column>
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24 </output>
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25 </data_table>
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26 </data_manager>
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27 </data_managers>
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