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annotate test-data/2019-08-27.1/AMR_DNA-Escherichia.tab @ 3:dddde93d5c20

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author estrain
date Fri, 06 Mar 2020 10:43:40 -0500
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estrain@3 1 NC_000913.3:3941808-3943350 16S_rrsC 794 G 16S_rrsC_A794G 16S_A794G AMINOGLYCOSIDE KASUGAMYCIN Escherichia_kasugamycin_resistant_16S_rrsC
estrain@3 2 NC_000913.3:3941808-3943350 16S_rrsC 794 T 16S_rrsC_A794T 16S_A794T AMINOGLYCOSIDE KASUGAMYCIN Escherichia_kasugamycin_resistant_16S_rrsC
estrain@3 3 NC_000913.3:3941808-3943350 16S_rrsC 926 A 16S_rrsC_G926A 16S_G926A AMINOGLYCOSIDE KASUGAMYCIN Escherichia_kasugamycin_resistant_16S_rrsC
estrain@3 4 NC_000913.3:3941808-3943350 16S_rrsC 926 C 16S_rrsC_G926C 16S_G926C AMINOGLYCOSIDE KASUGAMYCIN Escherichia_kasugamycin_resistant_16S_rrsC
estrain@3 5 NC_000913.3:3941808-3943350 16S_rrsC 926 T 16S_rrsC_G926T 16S_G926T AMINOGLYCOSIDE KASUGAMYCIN Escherichia_kasugamycin_resistant_16S_rrsC
estrain@3 6 NC_000913.3:3941808-3943350 16S_rrsC 1519 C 16S_rrsC_A1519C 16S_A1519C AMINOGLYCOSIDE KASUGAMYCIN Escherichia_kasugamycin_resistant_16S_rrsC
estrain@3 7 NC_000913.3:3941808-3943350 16S_rrsC 1519 G 16S_rrsC_A1519G 16S_A1519G AMINOGLYCOSIDE KASUGAMYCIN Escherichia_kasugamycin_resistant_16S_rrsC
estrain@3 8 NC_000913.3:3941808-3943350 16S_rrsC 1519 T 16S_rrsC_A1519T 16S_A1519T AMINOGLYCOSIDE KASUGAMYCIN Escherichia_kasugamycin_resistant_16S_rrsC
estrain@3 9 NC_000913.3:4166659-4168201 16S_rrsB 523 C 16S_rrsB_A523C 16S_A523C AMINOGLYCOSIDE STREPTOMYCIN Escherichia_streptomycin_resistant_16S_rrsB
estrain@3 10 NC_000913.3:4166659-4168201 16S_rrsB 527 T 16S_rrsB_G527T 16S_G527T AMINOGLYCOSIDE STREPTOMYCIN Escherichia_streptomycin_resistant_16S_rrsB
estrain@3 11 NC_000913.3:4166659-4168201 16S_rrsB 528 T 16S_rrsB_C528T 16S_C528T AMINOGLYCOSIDE STREPTOMYCIN Escherichia_streptomycin_resistant_16S_rrsB
estrain@3 12 NC_000913.3:4166659-4168201 16S_rrsB 964 G 16S_rrsB_A964G 16S_A964G TETRACYCLINE TETRACYCLINE Escherichia_tetracycline_resistant_16S_rrsB
estrain@3 13 NC_000913.3:4166659-4168201 16S_rrsB 1053 A 16S_rrsB_G1053A 16S_G1053A TETRACYCLINE TETRACYCLINE Escherichia_tetracycline_resistant_16S_rrsB
estrain@3 14 NC_000913.3:4166659-4168201 16S_rrsB 1054 T 16S_rrsB_C1054T 16S_C1054T TETRACYCLINE TETRACYCLINE Escherichia_tetracycline_resistant_16S_rrsB
estrain@3 15 NC_000913.3:4166659-4168201 16S_rrsB 1055 G 16S_rrsB_A1055G 16S_A1055G TETRACYCLINE TETRACYCLINE Escherichia_tetracycline_resistant_16S_rrsB
estrain@3 16 NC_000913.3:4166659-4168201 16S_rrsB 1058 C 16S_rrsB_G1058C 16S_G1058C TETRACYCLINE TETRACYCLINE Escherichia_tetracycline_resistant_16S_rrsB
estrain@3 17 NC_000913.3:4166659-4168201 16S_rrsB 1064 A 16S_rrsB_G1064A 16S_G1064A AMINOGLYCOSIDE KANAMYCIN Escherichia_kanamycin_A_resistant_16S_rrsB
estrain@3 18 NC_000913.3:4166659-4168201 16S_rrsB 1064 C 16S_rrsB_G1064C 16S_G1064C AMINOGLYCOSIDE SPECTINOMYCIN Escherichia_spectinomycin_resistant_16S_rrsB
estrain@3 19 NC_000913.3:4166659-4168201 16S_rrsB 1064 T 16S_rrsB_G1064T 16S_G1064T AMINOGLYCOSIDE SPECTINOMYCIN Escherichia_spectinomycin_resistant_16S_rrsB
estrain@3 20 NC_000913.3:4166659-4168201 16S_rrsB 1066 T 16S_rrsB_C1066T 16S_C1066T AMINOGLYCOSIDE SPECTINOMYCIN Escherichia_spectinomycin_resistant_16S_rrsB
estrain@3 21 NC_000913.3:4166659-4168201 16S_rrsB 1068 A 16S_rrsB_G1068A 16S_G1068A AMINOGLYCOSIDE SPECTINOMYCIN Escherichia_spectinomycin_resistant_16S_rrsB
estrain@3 22 NC_000913.3:4166659-4168201 16S_rrsB 1192 T 16S_rrsB_C1192T 16S_C1192T AMINOGLYCOSIDE SPECTINOMYCIN Escherichia_spectinomycin_resistant_16S_rrsB
estrain@3 23 NC_000913.3:4166659-4168201 16S_rrsB 1406 A 16S_rrsB_T1406A 16S_T1406A AMINOGLYCOSIDE G418 Escherichia_G418_resistant_16S_rrsB
estrain@3 24 NC_000913.3:4166659-4168201 16S_rrsB 1408 G 16S_rrsB_A1408G 16S_A1408G AMINOGLYCOSIDE AMINOGLYCOSIDE Escherichia_gentamicin_C/neomycin/paromomycin_resistant_16S_rrsB
estrain@3 25 NC_000913.3:4166659-4168201 16S_rrsB 1499 G 16S_rrsB_A1499G 16S_A1499G EDEINE EDEINE Escherichia_edeine_resistant_16S_rrsB
estrain@3 26 NC_004431.1:237160-240064 23S 754 A 23S_T754A 23S_T754A MACROLIDE MACROLIDE Escherichia_erythromycin/telithromycin_resistant_23S
estrain@3 27 NC_004431.1:237160-240064 23S 2032 A 23S_G2032A 23S_G2032A MACROLIDE/OXAZOLIDINONE MACROLIDE/OXAZOLIDINONE Escherichia_clindamycin/oxazolidinone_resistant_23S
estrain@3 28 NC_004431.1:237160-240064 23S 2032 C 23S_G2032C 23S_G2032C OXAZOLIDINONE OXAZOLIDINONE Escherichia_oxazolidinone_resistant_23S
estrain@3 29 NC_004431.1:237160-240064 23S 2032 T 23S_G2032T 23S_G2032T MACROLIDE/OXAZOLIDINONE MACROLIDE/OXAZOLIDINONE Escherichia_clarithromycin/oxazolidinone_resistant_23S
estrain@3 30 NC_004431.1:237160-240064 23S 2057 A 23S_G2057A 23S_G2057A MACROLIDE/PHENICOL MACROLIDE/CHLORAMPHENICOL Escherichia_chloramphenicol/erythromycin/telithromycin_resistant_23S
estrain@3 31 NC_004431.1:237160-240064 23S 2058 G 23S_A2058G 23S_A2058G MACROLIDE MACROLIDE Escherichia_erythromycin/telithromycin_resistant_23S
estrain@3 32 NC_004431.1:237160-240064 23S 2058 T 23S_A2058T 23S_A2058T MACROLIDE MACROLIDE Escherichia_erythromycin/telithromycin_resistant_23S
estrain@3 33 NC_004431.1:237160-240064 23S 2447 T 23S_G2447T 23S_G2447T OXAZOLIDINONE OXAZOLIDINONE Escherichia_oxazolidinone_resistant_23S
estrain@3 34 NC_004431.1:237160-240064 23S 2611 T 23S_C2611T 23S_C2611T MACROLIDE MACROLIDE Escherichia_erythromycin/telithromycin_resistant_23S