Mercurial > repos > estrain > seqsero2_v1_0_1

diff seqsero2.xml @ 20:b2b1d018b90d

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author estrain
date Sat, 07 Sep 2019 13:42:11 -0400
parents b43b7ef0df6a
children 55d2ec45737f
line wrap: on
line diff
--- a/seqsero2.xml	Sat Sep 07 13:16:43 2019 -0400
+++ b/seqsero2.xml	Sat Sep 07 13:42:11 2019 -0400
@@ -12,6 +12,10 @@
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
       echo "SeqSero 2 v. 1.0.1" ;
+      cp $__tool_directory__/SalmID.py .;
+      cp $__tool_directory__/invA_mers_dict .;
+      cp $__tool_directory__/rpoB_mers_dict .;
+
       #if $reads.reads_select == 'history'
       #set $name = $reads.forward.name.split('.')[0].replace(' ','_')
       #set $forward = $reads.forward