Mercurial > repos > galaxytrakr > aws_sra
changeset 15:25cf81d65cb8 draft
planemo upload for repository https://github.com/CFSAN-Biostatistics/galaxytrakr-tools commit fd740a9434d21f68658fe261b1b043033e491b05
| author | galaxytrakr |
|---|---|
| date | Mon, 23 Mar 2026 20:18:33 +0000 |
| parents | 27569ff426e0 |
| children | 58cc45662c63 |
| files | aws_sra.xml |
| diffstat | 1 files changed, 3 insertions(+), 3 deletions(-) [+] |
line wrap: on
line diff
--- a/aws_sra.xml Mon Mar 23 20:09:31 2026 +0000 +++ b/aws_sra.xml Mon Mar 23 20:18:33 2026 +0000 @@ -1,4 +1,4 @@ -<tool id="aws_sra" name="NCBI SRA AWS Fetch" version="0.3.0+gt_0.14" profile="23.0"> +<tool id="aws_sra" name="NCBI SRA AWS Fetch" version="0.3.0+gt_0.15" profile="23.0"> <description>Fetches SRA runs from AWS and converts them to FASTQ</description> <requirements> @@ -69,10 +69,10 @@ <outputs> <!-- These collections will gather all the files produced by the loop --> <collection name="output_r1" type="list" label="${run_type.accession or 'FASTQ Reads (R1)'}"> - <discover_datasets pattern="(?P<designation>.+)_1\.fastq\.gz" format="fastqsanger.gz" /> + <discover_datasets pattern="(?P<designation>.+)_1\.fastq\.gz" format="fastqsanger.gz" /> </collection> <collection name="output_r2" type="list" label="${run_type.accession or 'FASTQ Reads (R2)'}"> - <discover_datasets pattern="(?P<designation>.+)_2\.fastq\.gz" format="fastqsanger.gz" /> + <discover_datasets pattern="(?P<designation>.+)_2\.fastq\.gz" format="fastqsanger.gz" /> <filter>layout == 'paired'</filter> </collection> </outputs>