Mercurial > repos > galaxytrakr > data_manager_humann2_database_downloader
comparison data_manager_conf.xml @ 0:4f93334e2a83 draft default tip
planemo upload commit 494109a0410b49a6d05b5b0aa61639b16893bd04
| author | galaxytrakr |
|---|---|
| date | Thu, 26 Mar 2026 20:05:32 +0000 |
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| children |
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| -1:000000000000 | 0:4f93334e2a83 |
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| 1 <?xml version="1.0"?> | |
| 2 <data_managers> | |
| 3 <data_manager tool_file="data_manager/data_manager_humann2_download.xml" id="data_manager_humann2_download" > | |
| 4 <data_table name="humann2_nucleotide_database"> <!-- Defines a Data Table to be modified. --> | |
| 5 <output> <!-- Handle the output of the Data Manager Tool --> | |
| 6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> | |
| 7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> | |
| 8 <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool --> | |
| 9 <column name="path" output_ref="out_file" > | |
| 10 <move type="directory"> | |
| 11 <source>${path}</source> | |
| 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">humann2/data/nucleotide_database/${dbkey}</target> | |
| 13 </move> | |
| 14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/humann2/data/nucleotide_database/${dbkey}</value_translation> | |
| 15 </column> | |
| 16 </output> | |
| 17 </data_table> | |
| 18 <data_table name="humann2_protein_database"> <!-- Defines a Data Table to be modified. --> | |
| 19 <output> <!-- Handle the output of the Data Manager Tool --> | |
| 20 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> | |
| 21 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> | |
| 22 <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool --> | |
| 23 <column name="path" output_ref="out_file" > | |
| 24 <move type="directory"> | |
| 25 <source>${path}</source> | |
| 26 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">humann2/data/protein_database/${dbkey}</target> | |
| 27 </move> | |
| 28 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/humann2/data/protein_database/${dbkey}</value_translation> | |
| 29 </column> | |
| 30 </output> | |
| 31 </data_table> | |
| 32 </data_manager> | |
| 33 </data_managers> |