Mercurial > repos > jpayne > cfsan_qaqc

view qa_core/sample/Output/output.xml @ 1:d1f1b65cff7a

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planemo upload
author jpayne
date Tue, 08 May 2018 20:46:10 -0400
parents dafec28bd37e
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<?xml version="1.0" ?>
<qaQcCoverageOutput>
    <version>galaxy/pure+mulcore+plots+qscore+basebal</version>
    <readCount>59994</readCount>
    <coverage>2</coverage>
    <averageQPerFile>[('forward_big.fastq.gz', 35.54551581739571), ('reverse_big.fastq.gz', 25.590399012754776)]</averageQPerFile>
    <qcStatus>Fail</qcStatus>
    <baseBalanceResult>
        <AT>0.957667053211</AT>
        <GC>0.982688971661</GC>
        <baseBalanceStatus>Pass</baseBalanceStatus>
    </baseBalanceResult>
    <reasonForFailure>qscore below 27.0</reasonForFailure>
</qaQcCoverageOutput>