Mercurial > repos > jpayne > cfsan_qaqc

changeset 1:d1f1b65cff7a

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planemo upload
author jpayne
date Tue, 08 May 2018 20:46:10 -0400
parents dafec28bd37e
children 021864b5a0a5
files cfsan-qaqc.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/cfsan-qaqc.xml	Tue May 08 18:54:20 2018 -0400
+++ b/cfsan-qaqc.xml	Tue May 08 20:46:10 2018 -0400
@@ -14,7 +14,7 @@
             #set name=$forward.name
         #end if
         mkdir plots &&
-        qa_core/gims_core.py --sequencingType "Illumina MiSeq"
+        $__tool_directory__/qa_core/gims_core.py --sequencingType "Illumina MiSeq"
                              --approximateGenomeSize $genomeSize
                              --coverageThreshold $covThreshold
                              --minimumQScore $minQ