Mercurial > repos > jpayne > refchooser

annotate test-data/test/taxonomy/salmonella/kraken_report.tsv @ 0:91bc7378c1c5 draft

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planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
author jpayne
date Mon, 11 Aug 2025 15:37:26 +0000
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1 10.92 7332 7332 U 0 unclassified
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2 89.08 59814 2144 R 1 root
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3 84.32 56619 9 R1 131567 cellular organisms
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4 84.31 56609 269 D 2 Bacteria
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5 83.89 56329 265 P 1224 Proteobacteria
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6 83.49 56057 543 C 1236 Gammaproteobacteria
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7 82.66 55505 2847 O 91347 Enterobacterales
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8 78.11 52445 9266 F 543 Enterobacteriaceae
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9 60.94 40917 4657 G 590 Salmonella
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10 53.95 36226 34357 S 28901 Salmonella enterica
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11 2.54 1705 1232 S1 59201 Salmonella enterica subsp. enterica
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12 0.10 66 0 S2 436295 Salmonella enterica subsp. enterica serovar Poona
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13 0.10 66 66 S3 1124962 Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673
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14 0.05 34 32 S2 70803 Salmonella enterica subsp. enterica serovar Minnesota
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15 0.00 2 2 S3 1124956 Salmonella enterica subsp. enterica serovar Minnesota str. ATCC 49284
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16 0.05 33 0 S2 913074 Salmonella enterica subsp. enterica serovar Inverness
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17 0.05 33 33 S3 941187 Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720
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18 0.04 30 0 S2 363569 Salmonella enterica subsp. enterica serovar Javiana
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19 0.04 30 30 S3 1267753 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992
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20 0.04 28 14 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo
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21 0.01 5 5 S3 1454603 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903
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22 0.01 5 5 S3 1454609 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 2009K-0792
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23 0.00 2 2 S3 1454604 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1904
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24 0.00 2 2 S3 1454610 Salmonella enterica subsp. enterica serovar Montevideo str. CDC 2011K-1674
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25 0.03 21 0 S2 57045 Salmonella enterica subsp. enterica serovar Paratyphi B
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26 0.03 20 20 S3 1016998 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7
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27 0.00 1 1 S3 224729 Salmonella enterica subsp. enterica serovar Java
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28 0.03 19 19 S2 46626 Salmonella enterica subsp. enterica serovar Give
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29 0.02 16 12 S2 913070 Salmonella enterica subsp. enterica serovar Gaminara
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30 0.01 4 4 S3 1242094 Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285
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31 0.02 12 0 S2 486994 Salmonella enterica subsp. enterica serovar Hvittingfoss
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32 0.02 12 12 S3 1242097 Salmonella enterica subsp. enterica serovar Hvittingfoss str. SA20014981
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33 0.02 12 12 S2 57743 Salmonella enterica subsp. enterica serovar Weltevreden
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34 0.02 12 0 S2 1242080 Salmonella enterica subsp. enterica serovar Djakarta
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35 0.02 12 12 S3 1242091 Salmonella enterica subsp. enterica serovar Djakarta str. S-1087
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36 0.02 11 10 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis
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37 0.00 1 1 S3 1412486 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19981857
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38 0.01 10 7 S2 82689 Salmonella enterica subsp. enterica serovar Muenster
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39 0.00 3 3 S3 1124958 Salmonella enterica subsp. enterica serovar Muenster str. 0315
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40 0.01 10 7 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium
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41 0.00 3 3 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810
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42 0.01 10 8 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul
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43 0.00 2 2 S3 702982 Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26
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44 0.01 10 0 S2 1151172 Salmonella enterica subsp. enterica serovar Abaetetuba
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45 0.01 10 10 S3 1208611 Salmonella enterica subsp. enterica serovar Abaetetuba str. ATCC 35640
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46 0.01 9 3 S2 595 Salmonella enterica subsp. enterica serovar Infantis
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47 0.01 6 6 S3 596155 Salmonella enterica subsp. enterica serovar Infantis str. SARB27
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48 0.01 9 3 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky
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49 0.01 6 6 S3 1242102 Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505
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50 0.01 9 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly
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51 0.01 9 9 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189
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52 0.01 9 0 S2 913076 Salmonella enterica subsp. enterica serovar Johannesburg
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53 0.01 9 9 S3 1242101 Salmonella enterica subsp. enterica serovar Johannesburg str. ST203
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54 0.01 9 4 S2 108619 Salmonella enterica subsp. enterica serovar Newport
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55 0.00 2 2 S3 796731 Salmonella enterica subsp. enterica serovar Newport str. CVM 21538
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56 0.00 2 2 S3 997339 Salmonella enterica subsp. enterica serovar Newport str. WA_14882
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57 0.00 1 1 S3 1454627 Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159
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58 0.01 7 7 S2 90370 Salmonella enterica subsp. enterica serovar Typhi
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59 0.01 6 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C
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60 0.01 6 6 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594
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61 0.01 6 6 S2 340188 Salmonella enterica subsp. enterica serovar Cerro
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62 0.01 6 0 S2 181798 Salmonella enterica subsp. enterica serovar Sloterdijk
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63 0.01 6 6 S3 938141 Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791
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64 0.01 6 0 S2 1242085 Salmonella enterica subsp. enterica serovar Macclesfield
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65 0.01 6 6 S3 1242107 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643
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66 0.01 5 0 S2 598 Salmonella enterica subsp. enterica serovar Rubislaw
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67 0.01 5 5 S3 938143 Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717
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68 0.01 5 0 S2 1243583 Salmonella enterica subsp. Enterica serovar Onderstepoort
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69 0.01 5 5 S3 1243584 Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086
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70 0.01 5 0 S2 28147 Salmonella enterica subsp. enterica serovar Oranienburg
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71 0.01 5 5 S3 997333 Salmonella enterica subsp. enterica serovar Oranienburg str. 0250
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72 0.01 5 0 S2 1243590 Salmonella enterica subsp. enterica serovar Quebec
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73 0.01 5 5 S3 1243591 Salmonella enterica subsp. enterica serovar Quebec str. S-1267
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74 0.00 3 1 S2 119912 Salmonella enterica subsp. enterica serovar Choleraesuis
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75 0.00 2 2 S3 904139 Salmonella enterica subsp. enterica serovar Choleraesuis str. SCSA50
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76 0.00 3 1 S2 134047 Salmonella enterica subsp. enterica serovar Bredeney
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77 0.00 2 2 S3 1194154 Salmonella enterica subsp. enterica serovar Bredeney str. CFSAN001080
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78 0.00 3 0 S2 913085 Salmonella enterica subsp. enterica serovar Wandsworth
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79 0.00 3 3 S3 1243595 Salmonella enterica subsp. enterica serovar Wandsworth str. SA20092095
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80 0.00 3 3 S2 600 Salmonella enterica subsp. enterica serovar Thompson
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81 0.00 3 3 S2 192953 Salmonella enterica subsp. enterica serovar Stanley
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82 0.00 2 0 S2 189201 Salmonella enterica subsp. enterica serovar Cubana
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83 0.00 2 2 S3 1271863 Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050
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84 0.00 2 0 S2 1242078 Salmonella enterica subsp. enterica serovar Antsalova
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85 0.00 2 2 S3 1242087 Salmonella enterica subsp. enterica serovar Antsalova str. S01-0511
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86 0.00 2 0 S2 29482 Salmonella enterica subsp. enterica serovar Abony
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87 0.00 2 2 S3 1029983 Salmonella enterica subsp. enterica serovar Abony str. 0014
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88 0.00 2 0 S2 286782 Salmonella enterica subsp. enterica serovar Stanleyville
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89 0.00 2 2 S3 1194159 Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624
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90 0.00 2 0 S2 260368 Salmonella enterica subsp. enterica serovar Bergen
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91 0.00 2 2 S3 1240708 Salmonella enterica subsp. enterica serovar Bergen str. ST350
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92 0.00 2 0 S2 58712 Salmonella enterica subsp. enterica serovar Anatum
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93 0.00 2 2 S3 1454585 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1735
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94 0.00 2 0 S2 1243577 Salmonella enterica subsp. enterica serovar Milwaukee
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95 0.00 2 2 S3 1243578 Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795
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96 0.00 2 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld
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97 0.00 2 2 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536
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98 0.00 2 2 S2 932733 Salmonella enterica subsp. enterica serovar Bardo
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
99 0.00 1 0 S2 1242081 Salmonella enterica subsp. enterica serovar Hillingdon
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
100 0.00 1 1 S3 1242096 Salmonella enterica subsp. enterica serovar Hillingdon str. N1529-D3
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
101 0.00 1 0 S2 1243599 Salmonella enterica subsp. enterica serovar Yovokome
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
102 0.00 1 1 S3 1243600 Salmonella enterica subsp. enterica serovar Yovokome str. S-1850
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
103 0.00 1 1 S2 1077085 Salmonella enterica subsp. enterica serovar Fresno
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
104 0.00 1 1 S2 483687 Salmonella enterica subsp. enterica serovar Concord
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
105 0.00 1 0 S2 192954 Salmonella enterica subsp. enterica serovar Mbandaka
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
106 0.00 1 1 S3 984237 Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
107 0.00 1 1 S2 260367 Salmonella enterica subsp. enterica serovar Aberdeen
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
108 0.00 1 0 S2 98360 Salmonella enterica subsp. enterica serovar Dublin
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
109 0.00 1 1 S3 687860 Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
110 0.00 1 1 S2 28150 Salmonella enterica subsp. enterica serovar Senftenberg
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
111 0.00 1 1 S2 594 Salmonella enterica subsp. enterica serovar Gallinarum
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
112 0.00 1 0 S2 149386 Salmonella enterica subsp. enterica serovar Chester
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
113 0.00 1 1 S3 941190 Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
114 0.11 77 53 S1 59204 Salmonella enterica subsp. diarizonae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
115 0.02 13 0 S2 1243611 Salmonella enterica subsp. diarizonae serovar 50:k:z
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
116 0.02 13 13 S3 1243612 Salmonella enterica subsp. diarizonae serovar 50:k:z str. MZ0080
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
117 0.02 11 0 S2 1243615 Salmonella enterica subsp. diarizonae serovar 65:c:z
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
118 0.02 11 11 S3 1243616 Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
119 0.06 41 20 S1 59202 Salmonella enterica subsp. salamae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
120 0.02 14 0 S2 1243601 Salmonella enterica subsp. salamae serovar 55:k:z39
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
121 0.02 14 14 S3 1243602 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
122 0.01 4 4 S2 297361 Salmonella enterica subsp. salamae serovar Greenside
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
123 0.00 3 3 S2 1710356 Salmonella enterica subsp. salamae serovar 57:z29:z42
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
124 0.04 25 1 S1 59203 Salmonella enterica subsp. arizonae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
125 0.03 17 0 S2 41515 Salmonella enterica subsp. arizonae serovar 62:z36:-
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
126 0.03 17 17 S3 1386967 Salmonella enterica subsp. arizonae serovar 62:z36:- str. RKS2983
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
127 0.01 7 7 S2 41514 Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
128 0.03 21 0 S1 59205 Salmonella enterica subsp. houtenae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
129 0.03 17 17 S2 523831 Salmonella enterica subsp. houtenae str. ATCC BAA-1581
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
130 0.01 4 4 S2 58100 Salmonella enterica subsp. houtenae serovar Houten
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
131 0.05 34 8 S 54736 Salmonella bongori
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
132 0.03 20 20 S1 1197719 Salmonella bongori N268-08
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
133 0.01 6 0 S1 41527 Salmonella bongori serovar 48:z41:--
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
134 0.01 6 6 S2 1382510 Salmonella bongori serovar 48:z41:-- str. RKS3044
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
135 2.68 1802 51 G 561 Escherichia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
136 2.58 1732 1569 S 562 Escherichia coli
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
137 0.13 88 0 S1 244319 Escherichia coli O26:H11
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
138 0.13 88 88 S2 573235 Escherichia coli O26:H11 str. 11368
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
139 0.06 37 37 S1 745156 Escherichia coli 1303
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
140 0.03 17 0 S1 1072458 Escherichia coli O7:K1
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
141 0.03 17 17 S2 1072459 Escherichia coli O7:K1 str. CE10
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
142 0.02 16 16 S1 409438 Escherichia coli SE11
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
143 0.00 3 3 S1 1954351 Escherichia coli APEC O2-211
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
144 0.00 2 2 S1 930406 Escherichia coli O157:H16
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
145 0.02 15 15 S 208962 Escherichia albertii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
146 0.00 3 3 S 1499973 Escherichia marmotae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
147 0.00 1 0 S 564 Escherichia fergusonii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
148 0.00 1 1 S1 585054 Escherichia fergusonii ATCC 35469
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
149 0.26 173 3 G 547 Enterobacter
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
150 0.25 166 97 G1 354276 Enterobacter cloacae complex
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
151 0.04 30 22 S 550 Enterobacter cloacae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
152 0.01 5 5 S1 1354030 Enterobacter cloacae P101
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
153 0.00 3 3 S1 1045856 Enterobacter cloacae EcWSU1
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
154 0.03 18 18 S 69218 Enterobacter cancerogenus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
155 0.01 5 5 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
156 0.01 4 0 S 158836 Enterobacter hormaechei
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
157 0.00 3 3 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
158 0.00 1 1 S1 1812934 Enterobacter hormaechei subsp. hoffmannii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
159 0.01 4 4 S 2027919 Enterobacter cloacae complex sp.
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
160 0.00 3 3 S 1812935 Enterobacter roggenkampii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
161 0.00 3 3 S 1915310 Enterobacter cloacae complex sp. ECNIH7
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
162 0.00 2 2 S 61645 Enterobacter asburiae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
163 0.00 2 2 S 1977566 Enterobacter sp. Crenshaw
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
164 0.00 1 1 S 399742 Enterobacter sp. 638
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
165 0.00 1 1 S 2051905 Enterobacter sp. CRENT-193
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
166 0.25 166 17 G 570 Klebsiella
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
167 0.16 107 73 S 573 Klebsiella pneumoniae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
168 0.05 34 0 S1 72407 Klebsiella pneumoniae subsp. pneumoniae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
169 0.05 34 34 S2 1123862 Klebsiella pneumoniae subsp. pneumoniae Kp13
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
170 0.06 38 38 S 571 Klebsiella oxytoca
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
171 0.00 3 3 S 244366 Klebsiella variicola
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
172 0.00 1 1 S 1463165 Klebsiella quasipneumoniae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
173 0.14 93 11 G 544 Citrobacter
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
174 0.06 39 13 G1 1344959 Citrobacter freundii complex
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
175 0.02 14 14 S 546 Citrobacter freundii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
176 0.01 7 7 S 2077148 Citrobacter freundii complex sp. CFNIH4
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
177 0.00 3 3 S 2066049 Citrobacter freundii complex sp. CFNIH2
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
178 0.00 1 1 S 67827 Citrobacter werkmanii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
179 0.00 1 1 S 2077149 Citrobacter freundii complex sp. CFNIH9
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
180 0.03 17 13 S 35703 Citrobacter amalonaticus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
181 0.01 4 4 S1 1261127 Citrobacter amalonaticus Y19
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
182 0.02 12 0 S 67825 Citrobacter rodentium
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
183 0.02 12 12 S1 637910 Citrobacter rodentium ICC168
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
184 0.01 7 7 S 1920110 Citrobacter sp. CFNIH10
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
185 0.00 3 3 S 1703250 Citrobacter sp. CRE-46
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
186 0.00 2 1 S 545 Citrobacter koseri
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
187 0.00 1 1 S1 290338 Citrobacter koseri ATCC BAA-895
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
188 0.00 1 1 S 2013114 Citrobacter sp. 86
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
189 0.00 1 1 S 2019568 Citrobacter sp. 92
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
190 0.02 14 0 G 158483 Cedecea
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
191 0.02 14 14 S 158822 Cedecea neteri
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
192 0.01 5 0 G 620 Shigella
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
193 0.01 5 5 S 622 Shigella dysenteriae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
194 0.01 5 1 G 160674 Raoultella
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
195 0.01 4 4 S 54291 Raoultella ornithinolytica
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
196 0.00 2 0 F1 191675 unclassified Enterobacteriaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
197 0.00 2 0 F2 36866 unclassified Enterobacteriaceae (miscellaneous)
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
198 0.00 1 1 S 693444 Enterobacteriaceae bacterium strain FGI 57
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
199 0.00 1 1 S 2066051 Enterobacteriaceae bacterium ENNIH1
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
200 0.00 2 0 G 1330545 Lelliottia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
201 0.00 2 2 S 61646 Lelliottia amnigena
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
202 0.18 118 1 F 1903411 Yersiniaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
203 0.14 97 13 G 613 Serratia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
204 0.12 79 79 S 615 Serratia marcescens
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
205 0.01 4 4 S 1327989 Serratia sp. FS14
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
206 0.00 1 1 S 2033438 Serratia sp. MYb239
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
207 0.03 19 0 G 629 Yersinia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
208 0.02 11 0 G1 1649845 Yersinia pseudotuberculosis complex
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
209 0.02 11 11 S 632 Yersinia pestis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
210 0.01 6 6 S 630 Yersinia enterocolitica
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
211 0.00 1 1 S 29485 Yersinia rohdei
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
212 0.00 1 1 S 419257 Yersinia massiliensis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
213 0.00 1 1 G 34037 Rahnella
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
214 0.09 58 0 F 1903412 Hafniaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
215 0.09 58 0 G 635 Edwardsiella
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
216 0.09 58 58 S 67780 Edwardsiella ictaluri
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
217 0.03 17 0 F 1903409 Erwiniaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
218 0.02 14 0 G 53335 Pantoea
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
219 0.02 12 0 S 66269 Pantoea stewartii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
220 0.02 12 0 S1 66271 Pantoea stewartii subsp. stewartii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
221 0.02 12 12 S2 660596 Pantoea stewartii subsp. stewartii DC283
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
222 0.00 1 1 S 553 Pantoea ananatis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
223 0.00 1 0 G1 1654067 Pantoea agglomerans group
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
224 0.00 1 1 S 549 Pantoea agglomerans
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
225 0.00 3 0 G 551 Erwinia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
226 0.00 2 2 S 1619313 Erwinia gerundensis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
227 0.00 1 0 S 338565 Erwinia tasmaniensis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
228 0.00 1 1 S1 465817 Erwinia tasmaniensis Et1/99
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
229 0.01 10 0 F 1903410 Pectobacteriaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
230 0.01 9 1 G 204037 Dickeya
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
231 0.00 3 3 S 204038 Dickeya dadantii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
232 0.00 3 3 S 1778540 Dickeya fangzhongdai
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
233 0.00 2 0 S 556 Dickeya chrysanthemi
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
234 0.00 2 2 S1 1223569 Dickeya chrysanthemi NCPPB 402
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
235 0.00 1 0 G 84565 Sodalis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
236 0.00 1 0 S 1486991 Candidatus Sodalis pierantonius
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
237 0.00 1 1 S1 2342 Candidatus Sodalis pierantonius str. SOPE
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
238 0.01 8 5 F 1903414 Morganellaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
239 0.00 2 0 G 29487 Photorhabdus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
240 0.00 1 1 S 230089 Photorhabdus thracensis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
241 0.00 1 1 S 291112 Photorhabdus asymbiotica
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
242 0.00 1 0 G 626 Xenorhabdus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
243 0.00 1 1 S 40576 Xenorhabdus bovienii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
244 0.00 2 0 F 1903416 Budviciaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
245 0.00 2 0 G 82980 Leminorella
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
246 0.00 2 2 S 158841 Leminorella richardii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
247 0.01 5 0 O 135622 Alteromonadales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
248 0.01 4 0 F 267890 Shewanellaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
249 0.01 4 0 G 22 Shewanella
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
250 0.01 4 4 S 62322 Shewanella baltica
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
251 0.00 1 0 F 72275 Alteromonadaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
252 0.00 1 0 G 1172191 Catenovulum
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
253 0.00 1 1 S 2172099 Catenovulum sp. CCB-QB4
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
254 0.00 2 0 O 72274 Pseudomonadales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
255 0.00 1 0 F 468 Moraxellaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
256 0.00 1 0 G 469 Acinetobacter
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
257 0.00 1 1 S 1879050 Acinetobacter wuhouensis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
258 0.00 1 0 F 135621 Pseudomonadaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
259 0.00 1 0 G 286 Pseudomonas
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
260 0.00 1 0 G1 136841 Pseudomonas aeruginosa group
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
261 0.00 1 1 S 287 Pseudomonas aeruginosa
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
262 0.00 2 0 O 135625 Pasteurellales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
263 0.00 2 0 F 712 Pasteurellaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
264 0.00 1 0 G 713 Actinobacillus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
265 0.00 1 0 S 67854 Actinobacillus succinogenes
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
266 0.00 1 1 S1 339671 Actinobacillus succinogenes 130Z
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
267 0.00 1 0 G 416916 Aggregatibacter
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
268 0.00 1 1 S 732 Aggregatibacter aphrophilus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
269 0.01 6 0 C 28216 Betaproteobacteria
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
270 0.01 5 0 O 80840 Burkholderiales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
271 0.01 5 1 F 119060 Burkholderiaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
272 0.01 4 4 G 32008 Burkholderia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
273 0.00 1 0 O 32003 Nitrosomonadales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
274 0.00 1 0 F 206379 Nitrosomonadaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
275 0.00 1 0 G 914 Nitrosomonas
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
276 0.00 1 1 S 44574 Nitrosomonas communis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
277 0.00 1 0 P1 68525 delta/epsilon subdivisions
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
278 0.00 1 0 C 28221 Deltaproteobacteria
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
279 0.00 1 0 O 69541 Desulfuromonadales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
280 0.00 1 0 F 213422 Geobacteraceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
281 0.00 1 0 G 28231 Geobacter
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
282 0.00 1 1 S 345632 Geobacter pickeringii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
283 0.01 9 0 D1 1783272 Terrabacteria group
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
284 0.01 8 0 P 1239 Firmicutes
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
285 0.01 8 0 C 91061 Bacilli
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
286 0.01 7 0 O 1385 Bacillales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
287 0.01 4 0 F 186822 Paenibacillaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
288 0.01 4 0 G 44249 Paenibacillus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
289 0.01 4 4 S 1406 Paenibacillus polymyxa
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
290 0.00 3 0 F 90964 Staphylococcaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
291 0.00 3 0 G 1279 Staphylococcus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
292 0.00 3 3 S 1280 Staphylococcus aureus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
293 0.00 1 0 O 186826 Lactobacillales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
294 0.00 1 0 F 1300 Streptococcaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
295 0.00 1 0 G 1301 Streptococcus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
296 0.00 1 1 S 1349 Streptococcus uberis
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
297 0.00 1 0 P 1297 Deinococcus-Thermus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
298 0.00 1 0 C 188787 Deinococci
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
299 0.00 1 0 O 118964 Deinococcales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
300 0.00 1 0 F 183710 Deinococcaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
301 0.00 1 1 G 1298 Deinococcus
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
302 0.00 2 0 D1 1783270 FCB group
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
303 0.00 2 0 D2 68336 Bacteroidetes/Chlorobi group
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
304 0.00 2 0 P 976 Bacteroidetes
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
305 0.00 2 0 C 117743 Flavobacteriia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
306 0.00 2 0 O 200644 Flavobacteriales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
307 0.00 2 0 F 49546 Flavobacteriaceae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
308 0.00 2 0 G 417127 Zunongwangia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
309 0.00 2 0 S 398743 Zunongwangia profunda
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
310 0.00 2 2 S1 655815 Zunongwangia profunda SM-A87
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
311 0.00 1 0 D 2759 Eukaryota
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
312 0.00 1 0 D1 33154 Opisthokonta
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
313 0.00 1 0 K 33208 Metazoa
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
314 0.00 1 0 K1 6072 Eumetazoa
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
315 0.00 1 0 K2 33213 Bilateria
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
316 0.00 1 0 K3 33511 Deuterostomia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
317 0.00 1 0 P 7711 Chordata
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
318 0.00 1 0 P1 89593 Craniata
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
319 0.00 1 0 P2 7742 Vertebrata
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
320 0.00 1 0 P3 7776 Gnathostomata
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
321 0.00 1 0 P4 117570 Teleostomi
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
322 0.00 1 0 P5 117571 Euteleostomi
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
323 0.00 1 0 P6 8287 Sarcopterygii
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
324 0.00 1 0 P7 1338369 Dipnotetrapodomorpha
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
325 0.00 1 0 P8 32523 Tetrapoda
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
326 0.00 1 0 P9 32524 Amniota
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
327 0.00 1 0 C 40674 Mammalia
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
328 0.00 1 0 C1 32525 Theria
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
329 0.00 1 0 C2 9347 Eutheria
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
330 0.00 1 0 C3 1437010 Boreoeutheria
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
331 0.00 1 0 C4 314146 Euarchontoglires
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
332 0.00 1 0 O 9443 Primates
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
333 0.00 1 0 O1 376913 Haplorrhini
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
334 0.00 1 0 O2 314293 Simiiformes
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
335 0.00 1 0 O3 9526 Catarrhini
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
336 0.00 1 0 O4 314295 Hominoidea
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
337 0.00 1 0 F 9604 Hominidae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
338 0.00 1 0 F1 207598 Homininae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
339 0.00 1 0 G 9605 Homo
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
340 0.00 1 1 S 9606 Homo sapiens
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
341 1.56 1049 1049 R1 28384 other sequences
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
342 0.00 2 0 D 10239 Viruses
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
343 0.00 2 0 D1 35237 dsDNA viruses, no RNA stage
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
344 0.00 2 0 O 28883 Caudovirales
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
345 0.00 1 0 F 10662 Myoviridae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
346 0.00 1 0 F1 196896 unclassified Myoviridae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
347 0.00 1 1 S 1647463 Salmonella phage SEN34
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
348 0.00 1 0 F 10699 Siphoviridae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
349 0.00 1 0 F1 196894 unclassified Siphoviridae
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
350 0.00 1 1 S 1168549 Salmonella phage vB_SosS_Oslo