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annotate job_conf.yml @ 0:a9790ce778af draft default tip

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author jpayne
date Mon, 29 Sep 2025 20:04:28 +0000
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0
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1 runners:
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2 local:
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3 load: galaxy.jobs.runners.local:LocalJobRunner
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4 workers: 16
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5
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6 # handling:
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7 # processes:
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8 # handler0:
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9
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10 execution:
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11 default: local
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12 environments:
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13 local:
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14 runner: local
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15 docker_local:
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16 runner: local
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17 docker_enabled: true
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18 # container: "auto"
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19 docker_volumes: $defaults
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20 # docker_set_user: null
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21 docker_run_extra_arguments: "--entrypoint ''"
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22 docker_set_user: root
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23
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24 tools:
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25 - id: seqsero_v2
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26 # handler: handler0
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27 environment: docker_local
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28 - id: seqsero2s
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29 # handler: handler0
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30 environment: docker_local
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31
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32 limits:
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33 -
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34 # Amount of time a job can run (in any environment) before it
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35 # will be terminated by Galaxy.
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36 type: walltime
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37 value: '01:00:00'