Mercurial > repos > jpayne > snp_pipeline
comparison 4_merge_sites.xml @ 47:1667e4c08344
planemo upload commit 2107f35724b3f897c9414be40a9d14663cba9f4d-dirty
author | jpayne |
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date | Tue, 07 May 2019 16:12:09 -0400 |
parents | d273453b30bb |
children | fc7a28de6aa0 |
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46:d273453b30bb | 47:1667e4c08344 |
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3 <requirements> | 3 <requirements> |
4 <requirement type="package" version="2.2.6">bowtie2</requirement> | 4 <requirement type="package" version="2.2.6">bowtie2</requirement> |
5 <requirement type="package" version="1.2">samtools</requirement> | 5 <requirement type="package" version="1.2">samtools</requirement> |
6 <requirement type="package" version="1.0.6">bzip2</requirement> | 6 <requirement type="package" version="1.0.6">bzip2</requirement> |
7 <requirement type="package" version="1.0.1">snp-pipeline</requirement> | 7 <requirement type="package" version="1.0.1">snp-pipeline</requirement> |
8 <requirement type="package" version="3.6.0">python</requirement> | 8 <requirement type="package" version="3.7.3">python</requirement> |
9 </requirements> | 9 </requirements> |
10 <command detect_errors="exit_code"><![CDATA[ | 10 <command detect_errors="exit_code"><![CDATA[ |
11 export LD_LIBRARY_PATH="\$CONDA_DEFAULT_ENV/lib" && | 11 export LD_LIBRARY_PATH="\$CONDA_DEFAULT_ENV/lib" && |
12 # env && | 12 # env && |
13 python $__tool_directory__/snp-wind.py ./ | 13 python $__tool_directory__/snp-wind.py ./ |