Mercurial > repos > jpayne > snp_pipeline

diff 6_merge_vcfs.xml @ 53:40405b16de1d

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"planemo upload"
author jpayne
date Thu, 05 Nov 2020 15:30:24 -0500
parents 0acc1975bbeb
children 2939020396a4
line wrap: on
line diff
--- a/6_merge_vcfs.xml	Thu Nov 05 15:21:19 2020 -0500
+++ b/6_merge_vcfs.xml	Thu Nov 05 15:30:24 2020 -0500
@@ -16,8 +16,8 @@
             #end for
         > ./file
         && cat ./file
+        && cfsan_snp_pipeline merge_vcfs ./file
         && cat ./logs*/*log 1>&2
-        && cfsan_snp_pipeline merge_vcfs ./file
     ]]></command>
     <inputs>
         <param type="data_collection" format="vcf" collection_type="list" name="vcfs" label="List of VCFs" />