Mercurial > repos > kkonganti > centrifuge_process
view FAL11127.centrifuge.kreport.txt @ 3:91a82cbaf263 tip
"planemo upload"
| author | kkonganti |
|---|---|
| date | Wed, 22 Jun 2022 17:20:27 -0400 |
| parents | 00fa638e833e |
| children |
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0.08 19 19 U 0 unclassified 99.92 23835 0 - 1 root 99.92 23835 1 - 131567 cellular organisms 99.91 23833 7 D 2 Bacteria 99.78 23802 2 P 1224 Proteobacteria 99.74 23791 2 C 1236 Gammaproteobacteria 92.24 22004 18 O 91347 Enterobacterales 91.76 21889 537 F 543 Enterobacteriaceae 49.95 11916 117 G 561 Escherichia 47.39 11304 9100 S 562 Escherichia coli 4.61 1099 902 - 83334 Escherichia coli O157:H7 0.54 128 128 - 155864 Escherichia coli O157:H7 str. EDL933 0.22 53 53 - 1328859 Escherichia coli O157:H7 str. SS17 0.03 6 6 - 1330457 Escherichia coli O157:H7 str. SS52 0.02 4 4 - 386585 Escherichia coli O157:H7 str. Sakai 0.02 4 4 - 1343836 Escherichia coli O157:H7 str. F8092B 0.00 1 1 - 444450 Escherichia coli O157:H7 str. EC4115 0.00 1 1 - 544404 Escherichia coli O157:H7 str. TW14359 1.59 380 380 - 1045010 Escherichia coli O157 0.48 115 115 - 1055538 Escherichia coli O145 0.47 112 104 - 244320 Escherichia coli O55:H7 0.03 8 8 - 1048689 Escherichia coli O55:H7 str. RM12579 0.17 41 41 - 991919 Escherichia coli O145:NM 0.13 30 26 - 930406 Escherichia coli O157:H16 0.02 4 4 - 1446608 Escherichia coli O157:H16 str. 98-3133 0.13 30 30 - 991915 Escherichia coli O121:H19 0.10 25 22 - 1078034 Escherichia coli O145:H28 0.01 2 2 - 1248823 Escherichia coli O145:H28 str. RM12581 0.00 1 1 - 1248903 Escherichia coli O145:H28 str. RM12761 0.09 21 10 - 83333 Escherichia coli K-12 0.05 11 11 - 511145 Escherichia coli str. K-12 substr. MG1655 0.09 21 21 - 2848144 Escherichia coli O158:H23 0.08 19 19 - 869729 Escherichia coli UM146 0.07 16 0 - 1446738 Escherichia coli O39:NM 0.07 16 16 - 1446739 Escherichia coli O39:NM str. F8704-2 0.07 16 16 - 2861805 Escherichia coli O139:H1 0.06 14 14 - 1078032 Escherichia coli O45:H2 0.05 13 0 - 1055537 Escherichia coli O121 0.05 13 13 - 1055543 Escherichia coli O121 str. RM8352 0.05 13 13 - 2778655 Escherichia coli O167:H26 0.05 12 12 - 340186 Escherichia coli E110019 0.05 12 0 - 861906 Escherichia coli O44:H18 0.05 12 12 - 216592 Escherichia coli 042 0.05 11 11 - 2072463 Escherichia coli O78 0.05 11 11 - 2763104 Escherichia coli O150:H6 0.04 10 10 - 2491679 Escherichia coli O22:H8 0.03 8 0 - 1055536 Escherichia coli O103 0.03 8 8 - 1055540 Escherichia coli O103 str. RM8385 0.03 8 8 - 1329907 Escherichia coli APEC IMT5155 0.03 8 8 - 2027293 Escherichia coli O8:H8 0.03 7 7 - 168807 Escherichia coli O127:H6 0.03 7 7 - 481805 Escherichia coli ATCC 8739 0.03 7 7 - 696406 Escherichia coli UMNK88 0.03 6 6 - 2778657 Escherichia coli O9:H10 0.02 5 5 - 585057 Escherichia coli IAI39 0.02 5 5 - 1446746 Escherichia coli O6:H16 0.02 5 0 - 2233553 Escherichia coli O43 0.02 5 5 - 1055541 Escherichia coli O43 str. RM10042 0.02 5 5 - 2773707 Escherichia coli O19:H7 0.02 4 0 - 1603259 Escherichia coli O139:H28 0.02 4 4 - 331111 Escherichia coli O139:H28 str. E24377A 0.02 4 4 - 2027295 Escherichia coli O8:H28 0.02 4 4 - 2048780 Escherichia coli O25:H16 0.02 4 4 - 2048781 Escherichia coli O27:H7 0.02 4 4 - 2773705 Escherichia coli O18ac:H14 0.02 4 4 - 2773706 Escherichia coli O68:H12 0.02 4 4 - 2810404 Escherichia coli O7:H4 0.01 3 3 - 199310 Escherichia coli CFT073 0.01 3 0 - 404399 Escherichia coli O26 0.01 2 2 - 1055533 Escherichia coli O26 str. RM8426 0.00 1 1 - 1055534 Escherichia coli O26 str. RM10386 0.01 3 0 - 1072458 Escherichia coli O7:K1 0.01 3 3 - 1072459 Escherichia coli O7:K1 str. CE10 0.01 3 3 - 1078021 Escherichia coli O113:H21 0.01 3 3 - 1392854 Escherichia coli M8 0.01 3 3 - 2778656 Escherichia coli O20:H12 0.01 3 3 - 2848145 Escherichia coli O170:H18 0.01 3 3 - 2861806 Escherichia coli O141:H4 0.01 2 0 - 168927 Escherichia coli O111:H- 0.01 2 2 - 585396 Escherichia coli O111:H- str. 11128 0.01 2 2 - 244319 Escherichia coli O26:H11 0.01 2 2 - 331112 Escherichia coli HS 0.01 2 2 - 431946 Escherichia coli SE15 0.01 2 2 - 439855 Escherichia coli SMS-3-5 0.01 2 2 - 585055 Escherichia coli 55989 0.01 2 2 - 741093 Escherichia coli Xuzhou21 0.01 2 2 - 745156 Escherichia coli 1303 0.01 2 2 - 1001989 Escherichia coli PCN033 0.01 2 0 - 1038927 Escherichia coli O104:H4 0.01 2 2 - 1048254 Escherichia coli O104:H4 str. C227-11 0.01 2 0 - 1055535 Escherichia coli O111 0.01 2 2 - 1055542 Escherichia coli O111 str. RM9322 0.01 2 0 - 1055539 Escherichia coli O91 0.01 2 2 - 1055545 Escherichia coli O91 str. RM7190 0.01 2 2 - 1274814 Escherichia coli APEC O78 0.01 2 2 - 1446701 Escherichia coli O169:H41 0.01 2 2 - 2592065 Escherichia coli O1:H42 0.01 2 2 - 2605619 Escherichia coli O16:H48 0.01 2 2 - 2605620 Escherichia coli O80:H26 0.01 2 2 - 2697517 Escherichia coli O84:H7 0.01 2 2 - 2810407 Escherichia coli O126:H45 0.00 1 1 - 316435 Escherichia coli Nissle 1917 0.00 1 1 - 409438 Escherichia coli SE11 0.00 1 1 - 469008 Escherichia coli BL21(DE3) 0.00 1 1 - 566546 Escherichia coli W 0.00 1 1 - 714962 Escherichia coli IHE3034 0.00 1 1 - 758831 Escherichia coli ECC-1470 0.00 1 1 - 941323 Escherichia coli VR50 0.00 1 1 - 1311757 Escherichia coli ACN001 0.00 1 1 - 1355101 Escherichia coli JJ1887 0.00 1 1 - 1358422 Escherichia coli PCN061 0.00 1 1 - 1954351 Escherichia coli APEC O2-211 0.00 1 1 - 2048775 Escherichia coli O114:H49 0.00 1 1 - 2048778 Escherichia coli O178:H19 0.00 1 1 - 2079157 Escherichia coli O2:H1 0.00 1 1 - 2491692 Escherichia coli O39:H21 0.00 1 1 - 2491878 Escherichia coli O4:H5 0.00 1 1 - 2778652 Escherichia coli O100:H21 0.00 1 1 - 2810405 Escherichia coli O89m:H10 0.00 1 1 - 2810406 Escherichia coli O89m:H9 0.00 1 1 - 2810409 Escherichia coli H20 0.00 1 1 - 2874051 Escherichia coli O99:H6 0.00 1 1 - 2874052 Escherichia coli O16:H6 0.99 236 236 S 564 Escherichia fergusonii 0.55 132 128 S 208962 Escherichia albertii 0.02 4 4 - 1440052 Escherichia albertii KF1 0.32 76 76 S 1499973 Escherichia marmotae 0.21 51 0 - 2608889 unclassified Escherichia 0.21 49 49 S 2044467 Escherichia sp. E4742 0.01 2 2 S 2725997 Escherichia sp. SCLE84 21.99 5245 76 G 547 Enterobacter 20.58 4910 650 S 354276 Enterobacter cloacae complex 11.39 2718 2718 S 208224 Enterobacter kobei 3.18 759 656 S 158836 Enterobacter hormaechei 0.26 63 63 - 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.13 31 31 - 1812934 Enterobacter hormaechei subsp. hoffmannii 0.02 5 5 - 301105 Enterobacter hormaechei subsp. hormaechei 0.02 4 4 - 299766 Enterobacter hormaechei subsp. steigerwaltii 2.00 476 5 - 2757714 unclassified Enterobacter cloacae complex 1.49 356 356 S 2912628 Enterobacter cloacae complex sp. ECL414 0.43 102 102 S 2027919 Enterobacter cloacae complex sp. 0.02 5 5 S 2850492 Enterobacter cloacae complex sp. ECL78 0.02 5 5 S 2850493 Enterobacter cloacae complex sp. ECL112 0.00 1 1 S 2077137 Enterobacter cloacae complex sp. FDA-CDC-AR_0132 0.00 1 1 S 2850078 Enterobacter cloacae complex sp. ECL72 0.00 1 1 S 2912631 Enterobacter cloacae complex sp. ECL404 1.06 253 252 S 550 Enterobacter cloacae 0.00 1 0 - 69219 Enterobacter cloacae subsp. dissolvens 0.00 1 1 - 1104326 Enterobacter cloacae subsp. dissolvens SDM 0.10 24 24 S 1812935 Enterobacter roggenkampii 0.07 17 17 S 61645 Enterobacter asburiae 0.04 10 10 S 299767 Enterobacter ludwigii 0.01 2 2 S 69218 Enterobacter cancerogenus 0.00 1 1 S 2071710 Enterobacter sichuanensis 1.06 253 0 - 2608935 unclassified Enterobacter 1.03 246 246 S 1827481 Enterobacter sp. ODB01 0.01 3 3 S 2894203 Enterobacter sp. AN-K1 0.01 2 2 S 2500132 Enterobacter sp. N18-03635 0.00 1 1 S 2051905 Enterobacter sp. CRENT-193 0.00 1 1 S 2831892 Enterobacter sp. JBIWA008 0.02 5 5 S 881260 Enterobacter bugandensis 0.00 1 1 S 2478464 Enterobacter oligotrophicus 12.34 2943 1 - 2890311 Klebsiella/Raoultella group 12.30 2935 110 G 570 Klebsiella 10.81 2579 2459 S 573 Klebsiella pneumoniae 0.46 110 87 - 72407 Klebsiella pneumoniae subsp. pneumoniae 0.07 16 16 - 1193292 Klebsiella pneumoniae subsp. pneumoniae 1084 0.01 3 3 - 272620 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 0.01 2 2 - 1328324 Klebsiella pneumoniae subsp. pneumoniae KPNIH27 0.00 1 1 - 1125630 Klebsiella pneumoniae subsp. pneumoniae HS11286 0.00 1 1 - 1308539 Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 0.01 3 3 - 1284798 Klebsiella pneumoniae DMC1097 0.01 2 2 - 1328373 Klebsiella pneumoniae MGH 39 0.00 1 1 - 574 Klebsiella pneumoniae subsp. ozaenae 0.00 1 1 - 1244085 Klebsiella pneumoniae CG43 0.00 1 1 - 1284804 Klebsiella pneumoniae UHKPC07 0.00 1 1 - 1365186 Klebsiella pneumoniae KP-1 0.00 1 1 - 1420012 Klebsiella pneumoniae 30660/NJST258_1 0.42 99 82 S 244366 Klebsiella variicola 0.05 12 12 - 2590157 Klebsiella variicola subsp. variicola 0.02 4 4 - 2489014 Klebsiella variicola subsp. tropica 0.00 1 1 - 640131 Klebsiella variicola At-22 0.29 69 64 S 1463165 Klebsiella quasipneumoniae 0.02 5 5 - 1463164 Klebsiella quasipneumoniae subsp. similipneumoniae 0.10 24 8 - 2608929 unclassified Klebsiella 0.03 8 8 S 2897413 Klebsiella sp. KPN54798 0.03 7 7 S 2675717 Klebsiella sp. WP7-S18-CRE-03 0.00 1 1 S 2686364 Klebsiella sp. PCX 0.06 15 15 S 2489010 Klebsiella africana 0.05 13 13 S 548 Klebsiella aerogenes 0.05 13 13 S 571 Klebsiella oxytoca 0.03 7 7 S 2026240 Klebsiella quasivariicola 0.02 4 4 S 1134687 Klebsiella michiganensis 0.01 2 2 S 2058152 Klebsiella grimontii 0.03 7 4 G 160674 Raoultella 0.01 2 2 S 54291 Raoultella ornithinolytica 0.00 1 1 S 575 Raoultella planticola 2.88 688 4 G 620 Shigella 1.21 288 286 S 622 Shigella dysenteriae 0.01 2 2 - 300267 Shigella dysenteriae Sd197 1.01 242 186 S 623 Shigella flexneri 0.11 26 26 - 424717 Shigella flexneri 3a 0.05 13 11 - 42897 Shigella flexneri 2a 0.00 1 1 - 198214 Shigella flexneri 2a str. 301 0.00 1 1 - 198215 Shigella flexneri 2a str. 2457T 0.03 7 0 - 424718 Shigella flexneri 5a 0.03 7 7 - 1086030 Shigella flexneri 5a str. M90T 0.03 6 0 - 373383 Shigella flexneri 5 0.03 6 6 - 373384 Shigella flexneri 5 str. 8401 0.01 2 2 - 374923 Shigella flexneri 1a 0.00 1 1 - 424720 Shigella flexneri Y 0.00 1 1 - 591020 Shigella flexneri 2002017 0.49 117 107 S 621 Shigella boydii 0.03 8 8 - 300268 Shigella boydii Sb227 0.01 2 2 - 344609 Shigella boydii CDC 3083-94 0.16 37 37 S 624 Shigella sonnei 1.79 427 18 G 544 Citrobacter 1.46 349 18 S 1344959 Citrobacter freundii complex 0.55 132 132 S 1639133 Citrobacter portucalensis 0.50 120 120 S 546 Citrobacter freundii 0.17 41 41 S 133448 Citrobacter youngae 0.13 32 0 - 2816438 unclassified Citrobacter freundii complex 0.13 32 32 S 2077149 Citrobacter freundii complex sp. CFNIH9 0.01 3 3 S 67827 Citrobacter werkmanii 0.01 2 2 S 57706 Citrobacter braakii 0.00 1 1 S 67826 Citrobacter sedlakii 0.18 44 32 - 2644389 unclassified Citrobacter 0.01 3 3 S 184912 Citrobacter sp. TSA-1 0.01 3 3 S 2742624 Citrobacter sp. RHB25-C09 0.00 1 1 S 1573676 Citrobacter sp. R56 0.00 1 1 S 1920110 Citrobacter sp. CFNIH10 0.00 1 1 S 2742627 Citrobacter sp. RHB36-C18 0.00 1 1 S 2742655 Citrobacter sp. RHBSTW-00570 0.00 1 1 S 2742675 Citrobacter sp. RHBSTW-00986 0.00 1 1 S 2781952 Citrobacter sp. BDA59-3 0.02 4 4 S 35703 Citrobacter amalonaticus 0.01 3 3 S 545 Citrobacter koseri 0.01 3 2 S 67825 Citrobacter rodentium 0.00 1 1 - 637910 Citrobacter rodentium ICC168 0.01 2 2 S 67824 Citrobacter farmeri 0.00 1 1 S 1563222 Citrobacter pasteurii 0.00 1 1 S 1748967 Citrobacter cronae 0.00 1 1 S 2546350 Citrobacter arsenatis 0.00 1 1 S 2562449 Citrobacter tructae 0.27 65 2 G 590 Salmonella 0.26 61 13 S 28901 Salmonella enterica 0.18 44 0 - 59201 Salmonella enterica subsp. enterica 0.05 11 11 - 58712 Salmonella enterica subsp. enterica serovar Anatum 0.03 6 6 - 149387 Salmonella enterica subsp. enterica serovar Brandenburg 0.03 6 0 - 189201 Salmonella enterica subsp. enterica serovar Cubana 0.03 6 6 - 1271863 Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 0.02 5 4 - 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 - 990282 Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 0.01 2 2 - 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.01 2 2 - 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 1 0 - 600 Salmonella enterica subsp. enterica serovar Thompson 0.00 1 1 - 1064551 Salmonella enterica subsp. enterica serovar Thompson str. RM6836 0.00 1 0 - 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 1 1 - 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 1 1 - 70803 Salmonella enterica subsp. enterica serovar Minnesota 0.00 1 1 - 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 1 0 - 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 1 1 - 1243621 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110356 0.00 1 1 - 192953 Salmonella enterica subsp. enterica serovar Stanley 0.00 1 0 - 192954 Salmonella enterica subsp. enterica serovar Mbandaka 0.00 1 1 - 984237 Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 0.00 1 1 - 286782 Salmonella enterica subsp. enterica serovar Stanleyville 0.00 1 1 - 286783 Salmonella enterica subsp. enterica serovar Indiana 0.00 1 1 - 913070 Salmonella enterica subsp. enterica serovar Gaminara 0.00 1 0 - 913076 Salmonella enterica subsp. enterica serovar Johannesburg 0.00 1 1 - 1242101 Salmonella enterica subsp. enterica serovar Johannesburg str. ST203 0.00 1 1 - 2564349 Salmonella enterica subsp. enterica serovar Dessau 0.01 2 0 - 59204 Salmonella enterica subsp. diarizonae 0.01 2 2 - 2339227 Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) 0.00 1 1 - 59202 Salmonella enterica subsp. salamae 0.00 1 1 - 59203 Salmonella enterica subsp. arizonae 0.01 2 2 S 54736 Salmonella bongori 0.12 28 2 G 83654 Leclercia 0.07 17 1 - 2627398 unclassified Leclercia 0.03 7 7 S 1920114 Leclercia sp. LSNIH1 0.02 5 5 S 2681309 Leclercia sp. Colony189 0.01 2 2 S 1920116 Leclercia sp. LSNIH3 0.01 2 2 S 2815358 Leclercia sp. 4-9-1-25 0.04 9 9 S 83655 Leclercia adecarboxylata 0.04 9 2 G 1330547 Kosakonia 0.01 3 3 S 283686 Kosakonia radicincitans 0.01 3 3 S 1158459 Kosakonia sacchari 0.00 1 0 S 208223 Kosakonia cowanii 0.00 1 1 - 1300165 Kosakonia cowanii JCM 10956 = DSM 18146 0.03 8 2 G 413496 Cronobacter 0.02 5 2 S 28141 Cronobacter sakazakii 0.01 2 2 - 290339 Cronobacter sakazakii ATCC BAA-894 0.00 1 1 - 1138308 Cronobacter sakazakii ES15 0.00 1 0 - 2649764 unclassified Cronobacter 0.00 1 1 S 1906275 Cronobacter sp. JZ38 0.02 4 0 G 1330545 Lelliottia 0.02 4 4 S 61646 Lelliottia amnigena 0.02 4 0 G 1330546 Pluralibacter 0.02 4 2 S 1334193 [Enterobacter] lignolyticus 0.01 2 2 - 701347 [Enterobacter] lignolyticus SCF1 0.01 2 0 G 579 Kluyvera 0.00 1 1 S 61648 Kluyvera intermedia 0.00 1 0 - 2619995 unclassified Kluyvera 0.00 1 1 S 2873269 Kluyvera sp. CRP 0.01 2 0 G 702 Plesiomonas 0.01 2 2 S 703 Plesiomonas shigelloides 0.01 2 0 G 82976 Buttiauxella 0.00 1 1 S 82977 Buttiauxella agrestis 0.00 1 0 - 2634062 unclassified Buttiauxella 0.00 1 1 S 2479367 Buttiauxella sp. 3AFRM03 0.01 2 0 G 158483 Cedecea 0.01 2 2 S 158822 Cedecea neteri 0.01 2 0 G 1504576 Pseudocitrobacter 0.01 2 0 - 2638778 unclassified Pseudocitrobacter 0.01 2 2 S 2891570 Pseudocitrobacter sp. G163CM 0.00 1 0 G 158876 Yokenella 0.00 1 1 S 158877 Yokenella regensburgei 0.00 1 0 - 191675 Enterobacteriaceae incertae sedis 0.00 1 0 - 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.00 1 0 G 801 Candidatus Symbiopectobacterium 0.00 1 0 - 2794573 unclassified Candidatus Symbiopectobacterium 0.00 1 1 S 2871826 Candidatus Symbiopectobacterium sp. SyEd1 0.00 1 0 G 447792 Phytobacter 0.00 1 1 S 1972431 Phytobacter ursingii 0.00 1 0 G 1335483 Shimwellia 0.00 1 1 S 563 Shimwellia blattae 0.00 1 0 G 2726810 Scandinavium 0.00 1 1 S 1851514 Scandinavium goeteborgense 0.21 49 0 F 1903411 Yersiniaceae 0.14 33 1 G 629 Yersinia 0.08 20 20 S 631 Yersinia intermedia 0.03 6 6 S 630 Yersinia enterocolitica 0.02 4 4 S 29486 Yersinia ruckeri 0.01 2 2 S 419257 Yersinia massiliensis 0.06 14 3 G 613 Serratia 0.03 6 6 S 615 Serratia marcescens 0.00 1 1 S 47917 Serratia fonticola 0.00 1 1 S 61652 Serratia rubidaea 0.00 1 1 S 137545 Serratia quinivorans 0.00 1 1 S 300181 Serratia ureilytica 0.00 1 0 - 2647522 unclassified Serratia 0.00 1 1 S 2448483 Serratia sp. 3ACOL1 0.00 1 0 G 34037 Rahnella 0.00 1 1 S 1510570 Rahnella victoriana 0.00 1 0 G 41201 Ewingella 0.00 1 1 S 41202 Ewingella americana 0.07 16 0 F 1903409 Erwiniaceae 0.03 7 0 G 551 Erwinia 0.01 2 2 S 65700 Erwinia tracheiphila 0.01 2 2 S 182337 Erwinia billingiae 0.01 2 0 - 2622719 unclassified Erwinia 0.01 2 2 S 2675378 Erwinia sp. E602 0.00 1 1 S 1619313 Erwinia gerundensis 0.02 5 0 G 2100764 Mixta 0.01 2 2 S 1458355 Mixta theicola 0.01 2 2 S 1615494 Mixta intestinalis 0.00 1 1 S 665913 Mixta calida 0.02 4 2 G 53335 Pantoea 0.00 1 1 S 59814 Pantoea dispersa 0.00 1 1 S 1891675 Pantoea alhagi 0.06 14 0 F 1903410 Pectobacteriaceae 0.03 8 0 G 122277 Pectobacterium 0.02 4 4 S 554 Pectobacterium carotovorum 0.01 2 2 S 2488639 Pectobacterium versatile 0.00 1 1 S 180957 Pectobacterium brasiliense 0.00 1 0 - 2627739 unclassified Pectobacterium 0.00 1 1 S 2738983 Pectobacterium sp. PL64 0.02 5 1 G 204037 Dickeya 0.00 1 1 S 204042 Dickeya zeae 0.00 1 1 S 1089444 Dickeya solani 0.00 1 1 S 1401087 Dickeya aquatica 0.00 1 1 S 1778540 Dickeya fangzhongdai 0.00 1 0 G 71655 Brenneria 0.00 1 0 S 55210 Brenneria nigrifluens 0.00 1 1 - 1121120 Brenneria nigrifluens DSM 30175 = ATCC 13028 0.04 10 0 F 1903414 Morganellaceae 0.01 3 0 G 581 Morganella 0.01 3 3 S 582 Morganella morganii 0.01 3 1 G 583 Proteus 0.01 2 1 S 584 Proteus mirabilis 0.00 1 1 - 529507 Proteus mirabilis HI4320 0.01 3 0 G 626 Xenorhabdus 0.01 2 1 S 40576 Xenorhabdus bovienii 0.00 1 1 - 406818 Xenorhabdus bovienii SS-2004 0.00 1 1 S 290110 Xenorhabdus budapestensis 0.00 1 0 G 586 Providencia 0.00 1 1 S 126385 Providencia alcalifaciens 0.03 7 1 F 1903412 Hafniaceae 0.03 6 6 G 635 Edwardsiella 0.00 1 0 F 1903416 Budviciaceae 0.00 1 0 G 82980 Leminorella 0.00 1 1 S 158841 Leminorella richardii 4.90 1168 0 O 72274 Pseudomonadales 4.90 1168 0 F 135621 Pseudomonadaceae 4.90 1168 9 G 286 Pseudomonas 3.99 952 2 - 196821 unclassified Pseudomonas 3.87 922 922 S 2874628 Pseudomonas sp. p1(2021b) 0.02 5 5 S 1649877 Pseudomonas sp. CCOS 191 0.02 4 4 S 1259844 Pseudomonas sp. FGI182 0.01 3 3 S 2745519 Pseudomonas sp. OE 28.3 0.00 1 1 S 69328 Pseudomonas sp. VLB120 0.00 1 1 S 658630 Pseudomonas sp. CMR5c 0.00 1 1 S 1173283 Pseudomonas sp. R3-18-08 0.00 1 1 S 1207075 Pseudomonas sp. UW4 0.00 1 1 S 1636610 Pseudomonas sp. PONIH3 0.00 1 1 S 1736226 Pseudomonas sp. Leaf58 0.00 1 1 S 1827300 Pseudomonas sp. MYb193 0.00 1 1 S 2069256 Pseudomonas sp. XWY-1 0.00 1 1 S 2479393 Pseudomonas sp. LTGT-11-2Z 0.00 1 1 S 2749999 Pseudomonas sp. RtIB026 0.00 1 1 S 2811422 Pseudomonas sp. PDNC002 0.00 1 1 S 2866278 Pseudomonas sp. S07E 245 0.00 1 1 S 2866592 Pseudomonas sp. Marseille-Q3773 0.00 1 1 S 2866626 Pseudomonas sp. 2hn 0.00 1 1 S 2886360 Pseudomonas sp. HN2-3 0.00 1 1 S 2920387 Pseudomonas sp. LS.1a 0.76 182 1 S 136845 Pseudomonas putida group 0.75 178 170 S 303 Pseudomonas putida 0.03 6 6 - 1215088 Pseudomonas putida HB3267 0.00 1 1 - 1042876 Pseudomonas putida S16 0.00 1 1 - 1384061 Pseudomonas putida S13.1.2 0.00 1 1 S 76759 Pseudomonas monteilii 0.00 1 1 S 78327 Pseudomonas mosselii 0.00 1 1 S 1940636 Pseudomonas shirazica 0.04 9 0 S 136841 Pseudomonas aeruginosa group 0.04 9 9 S 287 Pseudomonas aeruginosa 0.01 3 0 S 136843 Pseudomonas fluorescens group 0.00 1 1 S 294 Pseudomonas fluorescens 0.00 1 1 S 76760 Pseudomonas rhodesiae 0.00 1 0 S 380021 Pseudomonas protegens 0.00 1 1 - 1420599 Pseudomonas protegens Cab57 0.01 2 1 S 312306 Pseudomonas entomophila 0.00 1 1 - 384676 Pseudomonas entomophila L48 0.01 2 2 S 2842357 Pseudomonas muyukensis 0.01 2 2 S 2894079 Pseudomonas oryziphila 0.00 1 0 S 136842 Pseudomonas chlororaphis group 0.00 1 1 S 587753 Pseudomonas chlororaphis 0.00 1 0 S 136846 Pseudomonas stutzeri group 0.00 1 0 S 578833 Pseudomonas stutzeri subgroup 0.00 1 1 S 316 Pseudomonas stutzeri 0.00 1 1 S 157782 Pseudomonas parafulva 0.00 1 1 S 237609 Pseudomonas alkylphenolica 0.00 1 1 S 485870 Pseudomonas anuradhapurensis 0.00 1 1 S 1306993 Pseudomonas soli 0.00 1 1 S 2842355 Pseudomonas fakonensis 2.54 607 0 O 2887326 Moraxellales 2.54 607 0 F 468 Moraxellaceae 2.54 607 1 G 469 Acinetobacter 2.51 598 1 S 909768 Acinetobacter calcoaceticus/baumannii complex 2.44 583 571 S 470 Acinetobacter baumannii 0.03 8 8 - 945556 Acinetobacter baumannii D1279779 0.01 3 3 - 1400867 Acinetobacter baumannii ZW85-1 0.00 1 1 - 400667 Acinetobacter baumannii ATCC 17978 0.03 7 6 S 48296 Acinetobacter pittii 0.00 1 1 - 871585 Acinetobacter pittii PHEA-2 0.03 6 6 S 106654 Acinetobacter nosocomialis 0.00 1 1 S 1530123 Acinetobacter seifertii 0.02 5 0 - 196816 unclassified Acinetobacter 0.02 5 5 S 2420300 Acinetobacter sp. FDAARGOS_493 0.01 2 2 S 134534 Acinetobacter gyllenbergii 0.00 1 1 S 756892 Acinetobacter indicus 0.01 3 0 O 135623 Vibrionales 0.01 3 0 F 641 Vibrionaceae 0.01 3 0 G 662 Vibrio 0.00 1 1 S 1074311 Vibrio alfacsensis 0.00 1 1 S 2572923 Vibrio taketomensis 0.00 1 1 S 2662262 Vibrio algicola 0.01 3 0 O 135624 Aeromonadales 0.01 3 0 F 84642 Aeromonadaceae 0.01 2 0 G 642 Aeromonas 0.00 1 0 S 644 Aeromonas hydrophila 0.00 1 1 - 1354302 Aeromonas hydrophila 4AK4 0.00 1 1 S 648 Aeromonas caviae 0.00 1 0 G 225143 Oceanisphaera 0.00 1 1 S 1903694 Oceanisphaera avium 0.00 1 0 O 118969 Legionellales 0.00 1 0 F 444 Legionellaceae 0.00 1 0 G 445 Legionella 0.00 1 1 S 446 Legionella pneumophila 0.00 1 0 O 135618 Methylococcales 0.00 1 0 F 403 Methylococcaceae 0.00 1 1 G 2822410 Methylotuvimicrobium 0.00 1 0 O 135619 Oceanospirillales 0.00 1 0 F 224372 Alcanivoracaceae 0.00 1 0 G 2025617 Ketobacter 0.00 1 1 S 1917421 Ketobacter alkanivorans 0.00 1 0 O 135625 Pasteurellales 0.00 1 0 F 712 Pasteurellaceae 0.00 1 0 G 745 Pasteurella 0.00 1 1 S 747 Pasteurella multocida 0.03 6 0 - 68525 delta/epsilon subdivisions 0.02 5 0 C 28221 Deltaproteobacteria 0.01 2 0 O 29 Myxococcales 0.00 1 0 - 80811 Cystobacterineae 0.00 1 0 F 31 Myxococcaceae 0.00 1 0 G 32 Myxococcus 0.00 1 1 S 34 Myxococcus xanthus 0.00 1 0 - 80812 Sorangiineae 0.00 1 0 F 1055686 Sandaracinaceae 0.00 1 0 G 1055688 Sandaracinus 0.00 1 1 S 927083 Sandaracinus amylolyticus 0.01 2 0 O 213115 Desulfovibrionales 0.01 2 0 F 194924 Desulfovibrionaceae 0.01 2 0 G 872 Desulfovibrio 0.00 1 1 S 876 Desulfovibrio desulfuricans 0.00 1 1 S 44742 Desulfovibrio fairfieldensis 0.00 1 0 O 69541 Desulfuromonadales 0.00 1 0 F 213422 Geobacteraceae 0.00 1 0 G 392332 Geoalkalibacter 0.00 1 1 S 483547 Geoalkalibacter subterraneus 0.00 1 0 C 29547 Epsilonproteobacteria 0.00 1 0 O 213849 Campylobacterales 0.00 1 0 F 72294 Campylobacteraceae 0.00 1 0 G 194 Campylobacter 0.00 1 1 S 204 Campylobacter showae 0.01 2 1 C 28216 Betaproteobacteria 0.00 1 0 O 206351 Neisseriales 0.00 1 0 F 1499392 Chromobacteriaceae 0.00 1 0 G 57739 Vogesella 0.00 1 0 - 2684990 unclassified Vogesella 0.00 1 1 S 2877939 Vogesella sp. XCS3 0.00 1 0 C 28211 Alphaproteobacteria 0.00 1 0 O 204458 Caulobacterales 0.00 1 0 F 76892 Caulobacteraceae 0.00 1 0 G 75 Caulobacter 0.00 1 1 S 1679497 Caulobacter flavus 0.08 20 0 - 1783272 Terrabacteria group 0.05 12 0 P 201174 Actinobacteria 0.05 12 0 C 1760 Actinomycetia 0.03 6 0 O 85010 Pseudonocardiales 0.03 6 0 F 2070 Pseudonocardiaceae 0.02 5 0 G 1813 Amycolatopsis 0.02 5 0 - 2618356 unclassified Amycolatopsis 0.02 5 5 S 2778070 Amycolatopsis sp. FDAARGOS 1241 0.00 1 0 G 1851 Saccharomonospora 0.00 1 1 S 75294 Saccharomonospora xinjiangensis 0.00 1 0 O 2037 Actinomycetales 0.00 1 0 F 2049 Actinomycetaceae 0.00 1 0 G 28263 Arcanobacterium 0.00 1 0 - 2631020 unclassified Arcanobacterium 0.00 1 1 S 2722751 Arcanobacterium sp. 2701 0.00 1 0 O 85006 Micrococcales 0.00 1 0 F 85023 Microbacteriaceae 0.00 1 0 G 96492 Frigoribacterium 0.00 1 0 - 2627005 unclassified Frigoribacterium 0.00 1 1 S 2596916 Frigoribacterium sp. NBH87 0.00 1 0 O 85007 Corynebacteriales 0.00 1 0 F 85026 Gordoniaceae 0.00 1 0 G 2053 Gordonia 0.00 1 1 S 2054 Gordonia bronchialis 0.00 1 0 O 85009 Propionibacteriales 0.00 1 0 F 85015 Nocardioidaceae 0.00 1 0 G 1839 Nocardioides 0.00 1 1 S 160826 Nocardioides aquaticus 0.00 1 0 O 85011 Streptomycetales 0.00 1 0 F 2062 Streptomycetaceae 0.00 1 0 G 1883 Streptomyces 0.00 1 1 S 2686304 Streptomyces broussonetiae 0.00 1 0 O 85012 Streptosporangiales 0.00 1 0 F 2012 Thermomonosporaceae 0.00 1 0 G 1988 Actinomadura 0.00 1 0 - 2626254 unclassified Actinomadura 0.00 1 1 S 1219491 Actinomadura sp. WMMB 499 0.03 7 0 P 1239 Firmicutes 0.03 7 0 C 91061 Bacilli 0.03 7 0 O 1385 Bacillales 0.01 3 0 F 90964 Staphylococcaceae 0.01 3 0 G 1279 Staphylococcus 0.00 1 1 S 1280 Staphylococcus aureus 0.00 1 1 S 29388 Staphylococcus capitis 0.00 1 1 S 70255 Staphylococcus condimenti 0.01 3 0 F 186822 Paenibacillaceae 0.01 2 0 G 55080 Brevibacillus 0.01 2 1 S 1465 Brevibacillus laterosporus 0.00 1 1 - 1121121 Brevibacillus laterosporus DSM 25 0.00 1 0 G 44249 Paenibacillus 0.00 1 1 S 1338368 Paenibacillus lentus 0.00 1 0 F 186817 Bacillaceae 0.00 1 0 G 400634 Lysinibacillus 0.00 1 1 S 1421 Lysinibacillus sphaericus 0.00 1 0 - 1798711 Cyanobacteria/Melainabacteria group 0.00 1 0 P 1117 Cyanobacteria 0.00 1 0 O 1890424 Synechococcales 0.00 1 0 F 1890426 Synechococcaceae 0.00 1 0 G 1129 Synechococcus 0.00 1 0 - 2626047 unclassified Synechococcus 0.00 1 1 S 1386941 Synechococcus sp. MVIR-18-1 0.02 4 0 - 1783270 FCB group 0.02 4 0 - 68336 Bacteroidetes/Chlorobi group 0.02 4 0 P 976 Bacteroidetes 0.00 1 0 C 117743 Flavobacteriia 0.00 1 0 O 200644 Flavobacteriales 0.00 1 0 F 2762318 Weeksellaceae 0.00 1 0 - 2782232 Chryseobacterium group 0.00 1 0 G 59732 Chryseobacterium 0.00 1 1 S 254 Chryseobacterium indoltheticum 0.00 1 0 C 117747 Sphingobacteriia 0.00 1 0 O 200666 Sphingobacteriales 0.00 1 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 84567 Pedobacter 0.00 1 0 - 2628915 unclassified Pedobacter 0.00 1 1 S 1727164 Pedobacter sp. PACM 27299 0.00 1 0 C 768503 Cytophagia 0.00 1 0 O 768507 Cytophagales 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 0 G 89966 Hymenobacter 0.00 1 0 - 2615202 unclassified Hymenobacter 0.00 1 1 S 1484118 Hymenobacter sp. PAMC 26628 0.00 1 0 C 1937959 Saprospiria 0.00 1 0 O 1936988 Saprospirales 0.00 1 0 F 1937961 Haliscomenobacteraceae 0.00 1 0 G 2349 Haliscomenobacter 0.00 1 0 S 2350 Haliscomenobacter hydrossis 0.00 1 1 - 760192 Haliscomenobacter hydrossis DSM 1100 0.00 1 0 D 2157 Archaea 0.00 1 0 P 28890 Euryarchaeota 0.00 1 0 - 2290931 Stenosarchaea group 0.00 1 0 C 183963 Halobacteria 0.00 1 0 O 1644060 Natrialbales 0.00 1 0 F 1644061 Natrialbaceae 0.00 1 0 G 121871 Haloterrigena 0.00 1 0 S 62320 Haloterrigena turkmenica 0.00 1 1 - 543526 Haloterrigena turkmenica DSM 5511