standard {
    process.executor = 'local'
    process.cpus = 1
    params.enable_conda = false
    params.enable_module = true
    singularity.enabled = false
    docker.enabled = false
}

stdkondagac {
    process.executor = 'local'
    process.cpus = 4
    params.enable_conda = true
    conda.enabled = true
    conda.useMicromamba = true
    params.enable_module = false
    singularity.enabled = false
    docker.enabled = false
}

stdcingularitygac {
    process.executor = 'local'
    process.cpus = 4
    params.enable_conda = false
    params.enable_module = false
    singularity.enabled = true
    singularity.autoMounts = true
    singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
    docker.enabled = false
}

raven {
    process.executor = 'slurm'
    process.queue = 'prod'
    process.memory = '10GB'
    process.cpus = 4
    params.enable_conda = false
    params.enable_module = true
    singularity.enabled = false
    docker.enabled = false
    clusterOptions = '--signal B:USR2'
}

eprod {
    process.executor = 'slurm'
    process.queue = 'combined'
    process.memory = '10GB'
    process.cpus = 4
    params.enable_conda = false
    params.enable_module = true
    singularity.enabled = false
    docker.enabled = false
    clusterOptions = '--signal B:USR2'
}

eprodkonda {
    process.executor = 'slurm'
    process.queue = 'lowmem,midmem,bigmem'
    process.memory = '10GB'
    process.cpus = 4
    params.enable_conda = true
    conda.enabled = true
    conda.useMicromamba = true
    params.enable_module = false
    singularity.enabled = false
    singularity.autoMounts = true
    singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
    docker.enabled = false
    clusterOptions = '--signal B:USR2'
}

eprodcingularity {
    process.executor = 'slurm'
    process.queue = 'lowmem,midmem,bigmem'
    process.memory = '10GB'
    process.cpus = 4
    params.enable_conda = false
    params.enable_module = false
    singularity.enabled = true
    singularity.autoMounts = true
    singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
    docker.enabled = false
    clusterOptions = '--signal B:USR2'
}

cingularity {
    process.executor = 'slurm'
    process.queue = 'prod'
    process.memory = '10GB'
    process.cpus = 4
    singularity.enabled = true
    singularity.autoMounts = true
    singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
    docker.enabled = false
    params.enable_conda = false
    params.enable_module = false
    clusterOptions = '--signal B:USR2'
}

cingularitygac {
    process.executor = 'slurm'
    executor.$slurm.exitReadTimeout = 120000
    process.queue = 'centriflaken'
    process.cpus = 4
    singularity.enabled = true
    singularity.autoMounts = true
    singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
    docker.enabled = false
    params.enable_conda = false
    params.enable_module = false
    clusterOptions = '-n 1 --signal B:USR2'
}

konda {
    process.executor = 'slurm'
    process.queue = 'prod'
    process.memory = '10GB'
    process.cpus = 4
    singularity.enabled = false
    docker.enabled = false
    params.enable_conda = true
    conda.enabled = true
    conda.useMicromamba = true
    params.enable_module = false
    clusterOptions = '--signal B:USR2'
}

kondagac {
    process.executor = 'slurm'
    executor.$slurm.exitReadTimeout = 120000
    process.queue = 'centriflaken'
    process.cpus = 4
    singularity.enabled = false
    docker.enabled = false
    params.enable_conda = true
    conda.enabled = true
    conda.useMicromamba = true
    params.enable_module = false
    clusterOptions = '-n 1 --signal B:USR2'
}

cfsanawsbatch {
    process.executor = 'awsbatch'
    process.queue = 'cfsan-nf-batch-job-queue'
    aws.batch.cliPath = '/home/ec2-user/miniconda/bin/aws'
    aws.batch.region = 'us-east-1'
    aws.batch.volumes = ['/hpc/db:/hpc/db:ro', '/hpc/scratch:/hpc/scratch:rw']
    singularity.enabled = false
    singularity.autoMounts = true
    docker.enabled = true
    params.enable_conda = false
    conda.enabled = false
    conda.useMicromamba = false
    params.enable_module = false
}

gxkubernetes {
        process.executor = 'k8s'
        k8s.namespace = 'galaxy'
        k8s.serviceAccount = 'default'
        k8s.pod = [
            [volumeClaim: 's3-centriflaken-claim', mountPath: '/galaxy/cfsan-centriflaken-db'],
            [volumeClaim: 's3-nextflow-claim', mountPath: '/galaxy/nf-work-dirs'],
            [volumeClaim: 'galaxy-galaxy-pvc', mountPath: '/galaxy/server/database'],
            [priorityClassName: 'galaxy-job-priority']
        ]
        singularity.enabled = false
        docker.enabled = true
        params.enable_conda = false
        params.enable_module = false
    }