Mercurial > repos > kkonganti > cfsan_centriflaken

changeset 46:0dd0ebe5cddf

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"planemo upload"
author kkonganti
date Thu, 07 Jul 2022 10:37:59 -0400
parents 62d848f2a128
children 30191f39a957
files cfsan_centriflaken.xml
diffstat 1 files changed, 2 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/cfsan_centriflaken.xml	Thu Jun 30 15:28:32 2022 -0400
+++ b/cfsan_centriflaken.xml	Thu Jul 07 10:37:59 2022 -0400
@@ -47,6 +47,8 @@
     -resume;
     mv './cpipes-output/${pipeline}-multiqc/multiqc_report.html' './multiqc_report.html';
     mv './cpipes-output/${pipeline}-results/kraken2_extract_contigs' kraken2_extract_contigs;
+    rm -rf ./cpipes-output;
+    rm -rf ./work
     ]]></command>
     <inputs>
         <param name="input" type="data_collection" collection_type="list" format="fastq,fastq.gz,fastqsanger.gz,fastqsanger" label="Input read collection" />