Mercurial > repos > kkonganti > cfsan_centriflaken

changeset 68:44d4e4078aaa

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"planemo upload"
author kkonganti
date Wed, 13 Jul 2022 14:02:19 -0400
parents 04c9f550eb08
children 905def920829
files cfsan_centriflaken.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/cfsan_centriflaken.xml	Wed Jul 13 13:55:47 2022 -0400
+++ b/cfsan_centriflaken.xml	Wed Jul 13 14:02:19 2022 -0400
@@ -17,8 +17,8 @@
         #for $key in $input_read_type_cond.input_pair.keys()
             #set $read_R1 = os.path.basename(str($input_read_type_cond.input_pair[$key]['forward']))
             #set $read_R2 = os.path.basename(str($input_read_type_cond.input_pair[$key]['reverse']))
-	        ln -sf "$input_read_type_cond.input_pair[$key]['forward']" './cpipes-input/$read_R1';
-            ln -sf "$input_read_type_cond.input_pair[$key]['reverse']" './cpipes-input/$read_R2';
+	        ln -sf "$input_read_type_cond.input_pair[$key]['forward']" './cpipes-input/$key';
+            ln -sf "$input_read_type_cond.input_pair[$key]['reverse']" './cpipes-input/$key';
 	    #end for
     #end if
 	$__tool_directory__/0.2.1/cpipes