Mercurial > repos > kkonganti > cfsan_cronology

diff 0.2.0/modules/quast/main.nf @ 18:a72c172df773 tip

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planemo upload
author kkonganti
date Mon, 15 Jul 2024 21:40:42 -0400
parents bc5d019d2c3a
children
line wrap: on
line diff
--- a/0.2.0/modules/quast/main.nf	Mon Jul 15 19:01:29 2024 -0400
+++ b/0.2.0/modules/quast/main.nf	Mon Jul 15 21:40:42 2024 -0400
@@ -60,7 +60,7 @@
             zcmd="gzip"
         
             if [ "${workflow.containerEngine}" != "null" ]; then
-                zver=\$( echo \$( \$zcmd --help 2>&1 ) | sed -e '1!d; s/ (.*\$//' )
+                zver=\$( echo \$( \$zcmd --version 2>&1 ) | sed -e '1!d; s/^.*\$zcmd //; s/ Copyright.*\$//' )
             else
                 zver=\$( echo \$( \$zcmd --version 2>&1 ) | sed "s/^.*(\$zcmd) //; s/\$zcmd //; s/ Copyright.*\$//" )
             fi