Mercurial > repos > rliterman > csp2
comparison CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/bbmap-39.01-1/bbversion.sh @ 69:33d812a61356
planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
| author | jpayne |
|---|---|
| date | Tue, 18 Mar 2025 17:55:14 -0400 |
| parents | |
| children |
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| 67:0e9998148a16 | 69:33d812a61356 |
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| 1 #!/bin/bash | |
| 2 | |
| 3 usage(){ | |
| 4 echo " | |
| 5 Written by Brian Bushnell | |
| 6 Last modified May 4, 2017 | |
| 7 | |
| 8 Description: Prints the BBTools version number. | |
| 9 Add an argument to print the version name too. | |
| 10 | |
| 11 Usage: bbversion.sh | |
| 12 " | |
| 13 } | |
| 14 | |
| 15 pushd . > /dev/null | |
| 16 DIR="${BASH_SOURCE[0]}" | |
| 17 while [ -h "$DIR" ]; do | |
| 18 cd "$(dirname "$DIR")" | |
| 19 DIR="$(readlink "$(basename "$DIR")")" | |
| 20 done | |
| 21 cd "$(dirname "$DIR")" | |
| 22 DIR="$(pwd)/" | |
| 23 popd > /dev/null | |
| 24 | |
| 25 CP="$DIR""current/" | |
| 26 | |
| 27 bbversion() { | |
| 28 local CMD="java -Xmx80m -cp $CP driver.BBVersion $@" | |
| 29 eval $CMD | |
| 30 } | |
| 31 | |
| 32 bbversion "$@" |