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comparison CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/bbmap-39.01-1/config/recalibrate.txt @ 68:5028fdace37b

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planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
author jpayne
date Tue, 18 Mar 2025 16:23:26 -0400
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67:0e9998148a16 68:5028fdace37b
1 #Quality recalibration parameters for CalcTrueQuality and BBDuk
2 recalpasses=2
3 observationcutoff_p1=100
4 observationcutoff_p2=200
5 recalqmax=41
6 recalqmin=2
7
8 #first pass matrices
9 loadq102_p1=f
10 loadqbp_p1=t
11 loadq10_p1=f
12 loadq12_p1=f
13 loadqb12_p1=f
14 loadqb012_p1=f
15 loadqb123_p1=t
16 loadqb234_p1=f
17 loadq12b12_p1=f
18 loadqp_p1=f
19 loadq_p1=f
20
21 #second pass matrices
22 loadq102_p2=f
23 loadqbp_p2=t
24 loadq10_p2=f
25 loadq12_p2=f
26 loadqb12_p2=f
27 loadqb012_p2=f
28 loadqb123_p2=f
29 loadqb234_p2=f
30 loadq12b12_p2=f
31 loadqp_p2=f
32 loadq_p2=f