--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/bbmap-39.01-1/current/sketch/AlignmentJob.java	Tue Mar 18 16:23:26 2025 -0400
@@ -0,0 +1,40 @@
+package sketch;
+
+import java.util.concurrent.ArrayBlockingQueue;
+
+public class AlignmentJob {
+	
+	AlignmentJob(Comparison c_, ArrayBlockingQueue<Comparison> dest_){
+		c=c_;
+		dest=dest_;
+	}
+	
+	void doWork(){
+		assert(!isPoison());
+		try {
+			c.ssuIdentity();
+		}catch (Throwable t){
+			t.printStackTrace();
+		}
+		put();
+	}
+	
+	private void put(){
+		boolean success=false;
+		while(!success){
+			try {
+				dest.put(c);
+				success=true;
+			} catch (InterruptedException e) {
+				// TODO Auto-generated catch block
+				e.printStackTrace();
+			}
+		}
+	}
+	
+	final boolean isPoison(){return c==null;}
+	
+	final Comparison c;
+	final ArrayBlockingQueue<Comparison> dest;
+	
+}
\ No newline at end of file