Mercurial > repos > rliterman > csp2
diff CSP2/conf/profiles.config @ 36:f6cd698b6f62
"planemo upload"
author | rliterman |
---|---|
date | Thu, 05 Dec 2024 18:09:26 -0500 |
parents | 6f4e6377ba64 |
children |
line wrap: on
line diff
--- a/CSP2/conf/profiles.config Thu Dec 05 16:30:58 2024 -0500 +++ b/CSP2/conf/profiles.config Thu Dec 05 18:09:26 2024 -0500 @@ -79,7 +79,7 @@ params.trim_name = "" } - csp2_galaxy1 { + csp2_galaxy { conda.enabled = true conda.useMicromamba = true conda.cacheDir = "${projectDir}/CSP2_env" @@ -99,25 +99,4 @@ params.mash_module = "" params.trim_name = "" } - - csp2_galaxy2 { - conda.enabled = true - conda.useMicromamba = true - conda.cacheDir = "${projectDir}/CSP2_env" - process.conda = "${projectDir}/conf/CSP2.yaml" - - process.queue = "q8cpu" - - executor.$slurm.exitReadTimeout = 120000 - - process.executor = 'slurm' - params.cores = 8 - params.python_module = "" - params.mummer_module = "" - params.skesa_module = "" - params.bedtools_module = "" - params.bbtools_module = "" - params.mash_module = "" - params.trim_name = "" - } }