view CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/include/mash/HashSet.h @ 69:33d812a61356

planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
author jpayne
date Tue, 18 Mar 2025 17:55:14 -0400
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// Copyright © 2015, Battelle National Biodefense Institute (BNBI);
// all rights reserved. Authored by: Brian Ondov, Todd Treangen,
// Sergey Koren, and Adam Phillippy
//
// See the LICENSE.txt file included with this software for license information.

#ifndef HashSet_h
#define HashSet_h

#include "HashList.h"
#include "robin_hood.h"
#include <vector>

class HashSet
{
public:

    HashSet(bool use64New) : use64(use64New) {}
    
    int size() const {return use64 ? hashes64.size() : hashes32.size();}
    void clear() {use64 ? hashes64.clear() : hashes32.clear();}
    uint32_t count(hash_u hash) const;
    void erase(hash_u hash);
    void insert(hash_u hash, uint32_t count = 1);
    void toHashList(HashList & hashList) const;
    void toCounts(std::vector<uint32_t> & counts) const;
    
private:
    
    bool use64;
    robin_hood::unordered_map<hash32_t, uint32_t> hashes32;
    robin_hood::unordered_map<hash64_t, uint32_t> hashes64;
};

#endif