Repository 'snp_pipeline'
hg clone https://toolrepo.galaxytrakr.org/repos/jpayne/snp_pipeline

Changeset 17:8626ed5eb356 (2018-01-31)
Previous changeset 16:e3a4351809ce (2018-01-31) Next changeset 18:97abaa8b8384 (2018-01-31)
Commit message:
planemo upload commit 7f6183b769772449fbcee903686b8d5ec5b7439f-dirty
modified:
7_smp_matrix.xml
7_smp_matrix.xml
diff -r e3a4351809ce -r 8626ed5eb356 7_smp_matrix.xml
7_smp_matrix.xml
--- a/7_smp_matrix.xml Wed Jan 31 12:28:26 2018 -0500
+++ b/7_smp_matrix.xml Wed Jan 31 12:32:01 2018 -0500
@@ -8,6 +8,7 @@
         <requirement type="package" version="3.4">python3</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
+        env &&
         python $__tool_directory__/snp-wind.py ./ -p "consensus.fasta"
             #for $fa in sorted($cons, key=lambda f: f.element_identifier)
                 -n $fa.element_identifier -f $fa