Repository 'snp_pipeline'
hg clone https://toolrepo.galaxytrakr.org/repos/jpayne/snp_pipeline

Changeset 33:b6bc9158666c (2018-02-01)
Previous changeset 32:e8b3f4f646b1 (2018-02-01) Next changeset 34:87f53c4a13df (2018-02-01)
Commit message:
planemo upload commit 7f6183b769772449fbcee903686b8d5ec5b7439f-dirty
modified:
6_merge_vcfs.xml
6_merge_vcfs.xml
diff -r e8b3f4f646b1 -r b6bc9158666c 6_merge_vcfs.xml
6_merge_vcfs.xml
--- a/6_merge_vcfs.xml Thu Feb 01 16:20:17 2018 -0500
+++ b/6_merge_vcfs.xml Thu Feb 01 17:46:04 2018 -0500
@@ -11,7 +11,7 @@
     <command detect_errors="exit_code"><![CDATA[
         export LD_LIBRARY_PATH="\$CONDA_DEFAULT_ENV/lib" &&
         env &&
-        ls -lah \$CONDA_DEFAULT_ENV &&
+        ls -lah \$CONDA_DEFAULT_ENV/bin &&
         ls -lah \$CONDA_DEFAULT_ENV/lib &&
         python $__tool_directory__/snp-wind.py ./ -p "consensus.vcf"
             #for $vcf in $vcfs