Mercurial > repos > kkonganti > cfsan_centriflaken

changeset 88:0c59342d0144

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"planemo upload"
author kkonganti
date Thu, 14 Jul 2022 09:38:11 -0400
parents 34d411a7bd4f
children 55a686167e40
files cfsan_centriflaken.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/cfsan_centriflaken.xml	Wed Jul 13 17:27:58 2022 -0400
+++ b/cfsan_centriflaken.xml	Thu Jul 14 09:38:11 2022 -0400
@@ -19,8 +19,8 @@
 	    #end for
     #elif (str($input_read_type_cond.input_read_type) == "paired"):
 	    #for _, $pair in enumerate($input_read_type_cond.input_pair)
-            #set read_R1 = re.sub('\:forward', '_forward', str($pair.forward.name))
-            #set read_R2 = re.sub('\:reverse', '_reverse', str($pair.reverse.name))
+            #set read_R1 = re.sub('[^\s\w\-]', '_', str($pair.forward.name))
+            #set read_R2 = re.sub('[^\s\w\-]', '_', str($pair.reverse.name))
             #if not str($pair.forward.name).endswith(('.fastq', '.fastq.gz')):
 	            #set read_R1 = $read_R1 + str('.') + str($pair.forward.ext)
             #end if