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comparison CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/mummer-3.23/src/tigr/tigrinc.hh @ 69:33d812a61356

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planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
author jpayne
date Tue, 18 Mar 2025 17:55:14 -0400
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67:0e9998148a16 69:33d812a61356
1 #ifndef __TIGRINC_HH
2 #define __TIGRINC_HH
3
4
5 #include <cstdio>
6 #include <cstdlib>
7 #include <cmath>
8 #include <cstring>
9 #include <cctype>
10 #include <climits>
11 #include <cfloat>
12 #include <ctime>
13 #include <cassert>
14 #include <cerrno>
15 #include <unistd.h>
16
17
18 #define TRUE 1
19 #define FALSE 0
20 #ifndef EXIT_FAILURE
21 #define EXIT_FAILURE -1
22 #endif
23 #ifndef EXIT_SUCCESS
24 #define EXIT_SUCCESS 0
25 #endif
26
27 #define INCR_SIZE 10000
28 #define SMALL_INIT_SIZE 100
29 #define INIT_SIZE 10000
30 #define MAX_LINE 1024
31
32
33 FILE * File_Open (const char *, const char *);
34 void * Safe_calloc (size_t, size_t);
35 void * Safe_malloc (size_t);
36 void * Safe_realloc (void *, size_t);
37 char Complement (char);
38 bool CompareIUPAC (char, char);
39 int Read_String (FILE *, char * &, long int &, char [], int);
40 void Reverse_Complement (char S [], long int Lo, long int Hi);
41
42 #endif