Mercurial > repos > rliterman > csp2
diff CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/mummer-3.23/src/tigr/tigrinc.hh @ 69:33d812a61356
planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
author | jpayne |
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date | Tue, 18 Mar 2025 17:55:14 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/mummer-3.23/src/tigr/tigrinc.hh Tue Mar 18 17:55:14 2025 -0400 @@ -0,0 +1,42 @@ +#ifndef __TIGRINC_HH +#define __TIGRINC_HH + + +#include <cstdio> +#include <cstdlib> +#include <cmath> +#include <cstring> +#include <cctype> +#include <climits> +#include <cfloat> +#include <ctime> +#include <cassert> +#include <cerrno> +#include <unistd.h> + + +#define TRUE 1 +#define FALSE 0 +#ifndef EXIT_FAILURE + #define EXIT_FAILURE -1 +#endif +#ifndef EXIT_SUCCESS + #define EXIT_SUCCESS 0 +#endif + +#define INCR_SIZE 10000 +#define SMALL_INIT_SIZE 100 +#define INIT_SIZE 10000 +#define MAX_LINE 1024 + + +FILE * File_Open (const char *, const char *); +void * Safe_calloc (size_t, size_t); +void * Safe_malloc (size_t); +void * Safe_realloc (void *, size_t); +char Complement (char); +bool CompareIUPAC (char, char); +int Read_String (FILE *, char * &, long int &, char [], int); +void Reverse_Complement (char S [], long int Lo, long int Hi); + +#endif