Mercurial > repos > rliterman > csp2
diff CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/mummer-3.23/src/kurtz/README @ 69:33d812a61356
planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
author | jpayne |
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date | Tue, 18 Mar 2025 17:55:14 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/mummer-3.23/src/kurtz/README Tue Mar 18 17:55:14 2025 -0400 @@ -0,0 +1,36 @@ +/* + Copyright (c) 2003 by Stefan Kurtz and The Institute for + Genomic Research. This is OSI Certified Open Source Software. + Please see the file LICENSE for licensing information and + the file ACKNOWLEDGEMENTS for names of contributors to the + code base. +*/ + +This directory contains the complete sources for 'mummer' (maxmat3.x) in three +subdirectories: + +- libbasedir contains some basic functions which are used for other programs + as well. To simplify reusing them I have put them in an extra library. + +- streesrc contains the source for the suffix tree library. + +- mm3src contains the application specific source code for the + program maxmat3.x + +You can compile it using make. Since we use include statements +in Makefile's your make has to support this feature. This e.g. +holds for gnu make. + +The code was tested for the following platforms: + +- linux on Intel PIII +- solaris2 on SUN-Sparc +- tru64 on Compaq-Alpha +- hp-machine with HP-UX + + +#-- FOR DEVELOPERS --# +If you would prefer to build the suffix tree source from this directory rather +than the top level MUMmer directory, please uncomment the lines that begin with +'##' in the Makefiles for each subdirectory to assure they use the appropriate +values for compilation.