Mercurial > repos > jpayne > refchooser

annotate test-data/test/resistance/UCLA_1626_resfinder/ResFinder_results.txt @ 0:91bc7378c1c5 draft

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planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
author jpayne
date Mon, 11 Aug 2025 15:37:26 +0000
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1 +--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
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2 | Beta-lactam |
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3 +-------------------+------------+--------------------------------+------------+-------------------------+-------------------+----------------------+----------------------------------------------------------------------------------+-----------------+
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4 | Resistance gene | Identity | Alignment Length/Gene Length | Coverage | Position in reference | Contig | Position in contig | Phenotype | Accession no. |
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5 |-------------------+------------+--------------------------------+------------+-------------------------+-------------------+----------------------+----------------------------------------------------------------------------------+-----------------|
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6 | blaOXA-193 | 99.8708 | 774/774 | 100 | 1..774 | Contig_17_116.474 | 33449..34222 | Unknown Beta-lactam | CP013032 |
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7 | blaOXA-61 | 99.8708 | 774/774 | 100 | 1..774 | Contig_17_116.474 | 33449..34222 | Amoxicillin, Amoxicillin+Clavulanic acid, Ampicillin, Ampicillin+Clavulanic acid | AY587956 |
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8 | blaOXA-489 | 99.8708 | 774/774 | 100 | 1..774 | Contig_17_116.474 | 33449..34222 | Unknown Beta-lactam | CP013733 |
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9 | blaOXA-453 | 99.8708 | 774/774 | 100 | 1..774 | Contig_17_116.474 | 33449..34222 | Unknown Beta-lactam | KR061507 |
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10 | blaOXA-452 | 99.8708 | 774/774 | 100 | 1..774 | Contig_17_116.474 | 33449..34222 | Unknown Beta-lactam | KR061505 |
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11 | blaOXA-451 | 99.8708 | 774/774 | 100 | 1..774 | Contig_17_116.474 | 33449..34222 | Unknown Beta-lactam | KR061504 |
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12 | blaOXA-450 | 99.8708 | 774/774 | 100 | 1..774 | Contig_17_116.474 | 33449..34222 | Unknown Beta-lactam | KR061502 |
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13 +-------------------+------------+--------------------------------+------------+-------------------------+-------------------+----------------------+----------------------------------------------------------------------------------+-----------------+
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15 +--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------+
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16 | Tetracycline |
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17 +-------------------+------------+--------------------------------+------------+-------------------------+-------------------------------------------+----------------------+----------------------------------------+-----------------+
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18 | Resistance gene | Identity | Alignment Length/Gene Length | Coverage | Position in reference | Contig | Position in contig | Phenotype | Accession no. |
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19 |-------------------+------------+--------------------------------+------------+-------------------------+-------------------------------------------+----------------------+----------------------------------------+-----------------|
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20 | tet(O) | 100 | 1920/1920 | 100 | 1..1920 | Contig_1_168.009_Circ [topology=circular] | 27131..29050 | Doxycycline, Tetracycline, Minocycline | M18896 |
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21 +-------------------+------------+--------------------------------+------------+-------------------------+-------------------------------------------+----------------------+----------------------------------------+-----------------+
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22
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23 ##################### beta-lactam #####################
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24 blaOXA-193, ID: 99.87 %, Alignment Length/Gene Length: 774/774, Coverage: 100.0, Positions in reference: 1..774, Contig name: Contig_17_116.474, Position: 33449..34222
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25
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26 ATGAAAAAAATAACTTTATTTTTGCTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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27 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
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28 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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29
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30 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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31 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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32 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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33
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34 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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35 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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36 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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37
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38 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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39 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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40 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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41
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42 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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43 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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44 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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45
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46 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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47 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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48 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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49
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50 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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51 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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52 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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53
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54 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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55 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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56 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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57
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58 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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59 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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60 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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61
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62 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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63 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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64 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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65
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66 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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67 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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68 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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69
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70 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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71 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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72 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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73
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74 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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75 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
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76 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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77
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78
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79 blaOXA-61, ID: 99.87 %, Alignment Length/Gene Length: 774/774, Coverage: 100.0, Positions in reference: 1..774, Contig name: Contig_17_116.474, Position: 33449..34222
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80
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81 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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82 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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83 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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84
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85 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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86 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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87 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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88
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89 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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90 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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91 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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92
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93 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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95 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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96
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97 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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99 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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100
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101 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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102 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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103 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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104
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105 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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106 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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107 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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108
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109 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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110 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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111 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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112
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113 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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114 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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115 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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116
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117 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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118 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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119 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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120
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121 GATGGGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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122 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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123 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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124
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125 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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126 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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127 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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128
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129 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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130 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
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131 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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132
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133
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134 blaOXA-489, ID: 99.87 %, Alignment Length/Gene Length: 774/774, Coverage: 100.0, Positions in reference: 1..774, Contig name: Contig_17_116.474, Position: 33449..34222
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135
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136 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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137 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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138 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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139
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140 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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141 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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142 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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143
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144 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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145 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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146 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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147
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148 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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149 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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150 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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151
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152 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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153 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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154 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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155
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156 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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157 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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158 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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159
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160 ATCAAAACTATGCAAGAATATTTAGACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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161 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
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162 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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163
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164 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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165 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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166 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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167
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168 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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169 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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170 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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171
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172 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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173 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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174 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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175
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176 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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178 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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179
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180 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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182 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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183
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184 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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185 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
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186 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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187
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188
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189 blaOXA-453, ID: 99.87 %, Alignment Length/Gene Length: 774/774, Coverage: 100.0, Positions in reference: 1..774, Contig name: Contig_17_116.474, Position: 33449..34222
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190
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191 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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192 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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193 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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194
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195 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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196 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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197 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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198
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199 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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200 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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201 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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202
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203 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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204 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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205 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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206
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207 TTTTATCACTATAGAGGTGGAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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208 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
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209 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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210
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211 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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212 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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213 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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214
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215 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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216 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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217 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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218
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219 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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220 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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221 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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222
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223 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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224 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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225 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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226
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227 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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228 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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229 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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230
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231 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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232 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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233 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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234
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235 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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236 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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237 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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238
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239 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
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241 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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242
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243
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244 blaOXA-452, ID: 99.87 %, Alignment Length/Gene Length: 774/774, Coverage: 100.0, Positions in reference: 1..774, Contig name: Contig_17_116.474, Position: 33449..34222
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245
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246 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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247 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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248 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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249
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250 TTAAATAATTGGTTTAAAGAGTATAATATAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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251 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
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252 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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253
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254 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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255 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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256 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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257
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258 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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260 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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261
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262 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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263 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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264 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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265
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266 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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267 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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268 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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269
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270 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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271 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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272 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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273
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274 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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275 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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276 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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277
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278 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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279 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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280 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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281
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282 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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283 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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284 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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285
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286 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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287 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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288 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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289
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290 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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291 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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292 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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293
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294 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
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296 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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297
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298
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299 blaOXA-451, ID: 99.87 %, Alignment Length/Gene Length: 774/774, Coverage: 100.0, Positions in reference: 1..774, Contig name: Contig_17_116.474, Position: 33449..34222
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300
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301 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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302 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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303 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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304
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305 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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306 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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307 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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308
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309 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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310 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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311 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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312
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313 AAAATTTTTAATGCTCTAATTGTACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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314 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
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315 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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316
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317 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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318 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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319 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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320
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321 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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322 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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323 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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324
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325 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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326 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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327 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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328
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329 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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330 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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331 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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332
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333 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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334 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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335 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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336
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337 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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338 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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339 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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340
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341 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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342 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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343 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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344
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345 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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346 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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347 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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348
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349 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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350 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
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351 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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352
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353
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354 blaOXA-450, ID: 99.87 %, Alignment Length/Gene Length: 774/774, Coverage: 100.0, Positions in reference: 1..774, Contig name: Contig_17_116.474, Position: 33449..34222
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355
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356 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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357 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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358 ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATA
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359
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360 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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361 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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362 TTAAATAATTGGTTTAAAGAGTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAA
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363
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364 ACTTGGGCGAGTAACGACTTTTCAAGGACTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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365 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
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366 ACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTTTCTCTCCCGCTTCCACTTTT
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367
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368 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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369 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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370 AAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT
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371
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372 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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373 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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374 TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTA
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375
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376 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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377 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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378 AGTTCAGCTATAAAATATTCTAATGTTCTTGCTTTTAAAGAAGTGGCAAGAAGAATTGGT
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379
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380 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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382 ATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATGGTAATGCTAAAATTTCCAAG
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383
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384 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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385 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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386 ATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG
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387
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388 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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389 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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390 CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAG
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391
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392 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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393 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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394 GAAATGATTTATTTAAAAAATATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAAT
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395
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396 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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397 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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398 GATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATTTAAAAGATGAAAATAAATAT
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399
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400 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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401 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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402 AAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA
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403
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404 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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405 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
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406 ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAGTTAAAAATGATGGCTAG
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407
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408
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409 ##################### tetracycline #####################
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410 tet(O), ID: 100.00 %, Alignment Length/Gene Length: 1920/1920, Coverage: 100.0, Positions in reference: 1..1920, Contig name: Contig_1_168.009_Circ [topology=circular], Position: 27131..29050
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411
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412 ATGAAAATAATTAACTTAGGCATTCTGGCTCACGTTGACGCAGGAAAGACAACATTAACG
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413 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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414 ATGAAAATAATTAACTTAGGCATTCTGGCTCACGTTGACGCAGGAAAGACAACATTAACG
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415
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416 GAAAGTTTATTGTATACCAGTGGTGCAATTGCAGAACTAGGGAGCGTAGATGAAGGCACA
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417 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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418 GAAAGTTTATTGTATACCAGTGGTGCAATTGCAGAACTAGGGAGCGTAGATGAAGGCACA
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419
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
420 ACAAGGACAGATACAATGAATTTGGAGCGTCAAAGGGGAATCACTATCCAGACAGCAGTG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
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421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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jpayne
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diff changeset
422 ACAAGGACAGATACAATGAATTTGGAGCGTCAAAGGGGAATCACTATCCAGACAGCAGTG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
423
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
424 ACATCTTTTCAGTGGGAGGATGTAAAAGTCAACATTATAGATACGCCAGGCCATATGGAT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
425 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
426 ACATCTTTTCAGTGGGAGGATGTAAAAGTCAACATTATAGATACGCCAGGCCATATGGAT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
427
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
428 TTTTTGGCGGAAGTATACCGTTCTTTATCCGTATTAGACGGAGCAGTATTATTAGTTTCT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
429 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
430 TTTTTGGCGGAAGTATACCGTTCTTTATCCGTATTAGACGGAGCAGTATTATTAGTTTCT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
431
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
432 GCAAAGGATGGCATACAGGCACAGACCCGTATACTGTTTCATGCACTACAGATAATGAAG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
433 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
434 GCAAAGGATGGCATACAGGCACAGACCCGTATACTGTTTCATGCACTACAGATAATGAAG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
435
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
436 ATTCCGACAATTTTTTTCATCAATAAAATTGACCAAGAGGGGATTGATTTGCCAATGGTA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
437 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
438 ATTCCGACAATTTTTTTCATCAATAAAATTGACCAAGAGGGGATTGATTTGCCAATGGTA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
439
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
440 TATCGGGAAATGAAAGCAAAGCTTTCTTCGGAAATTATAGTGAAGCAAAAGGTTGGGCAG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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441 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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jpayne
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diff changeset
442 TATCGGGAAATGAAAGCAAAGCTTTCTTCGGAAATTATAGTGAAGCAAAAGGTTGGGCAG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
443
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
444 CATCCCCATATAAATGTAACGGACAATGACGATATGGAACAGTGGGATGCGGTAATTATG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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445 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
446 CATCCCCATATAAATGTAACGGACAATGACGATATGGAACAGTGGGATGCGGTAATTATG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
447
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
448 GGAAACGATGAACTATTAGAGAAATATATGTCAGGGAAACCGTTTAAAATGTCAGAACTG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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449 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
450 GGAAACGATGAACTATTAGAGAAATATATGTCAGGGAAACCGTTTAAAATGTCAGAACTG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
451
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
452 GAACAGGAAGAAAACAGGAGATTCCAAAACGGAACGTTATTTCCCGTTTATCACGGAAGC
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
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453 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
454 GAACAGGAAGAAAACAGGAGATTCCAAAACGGAACGTTATTTCCCGTTTATCACGGAAGC
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
455
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
456 GCTAAAAACAATCTGGGGACTCGGCAGCTTATAGAAGTAATTGCCAGTAAATTTTATTCA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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457 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
458 GCTAAAAACAATCTGGGGACTCGGCAGCTTATAGAAGTAATTGCCAGTAAATTTTATTCA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
459
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
460 TCAACGCCTGAAGGTCAATCTGAACTATGCGGGCAGGTTTTTAAGATTGAATATTCAGAG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
461 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
462 TCAACGCCTGAAGGTCAATCTGAACTATGCGGGCAGGTTTTTAAGATTGAATATTCAGAG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
463
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
464 AAAAGGCGGCGTTTTGTTTATGTGCGTATATATAGCGGAACATTGCATTTGAGGGATGTT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
465 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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jpayne
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diff changeset
466 AAAAGGCGGCGTTTTGTTTATGTGCGTATATATAGCGGAACATTGCATTTGAGGGATGTT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
467
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
468 ATTAGAATATCTGAAAAAGAGAAAATAAAAATCACAGAGATGTATGTTCCGACAAACGGT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
469 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
470 ATTAGAATATCTGAAAAAGAGAAAATAAAAATCACAGAGATGTATGTTCCGACAAACGGT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
471
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
472 GAATTATATTCATCCGATACAGCCTGCTCTGGTGATATTGTAATTTTACCAAATGATGTT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
473 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
474 GAATTATATTCATCCGATACAGCCTGCTCTGGTGATATTGTAATTTTACCAAATGATGTT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
475
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
476 TTGCAGCTAAACAGTATTTTGGGGAACGAAATACTGTTGCCGCAGAGAAAATTTATTGAA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
478 TTGCAGCTAAACAGTATTTTGGGGAACGAAATACTGTTGCCGCAGAGAAAATTTATTGAA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
479
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
480 AATCCTCTCCCTATGATCCAAACAACGATTGCAGTAAAGAAATCTGAACAGCGGGAAATA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
482 AATCCTCTCCCTATGATCCAAACAACGATTGCAGTAAAGAAATCTGAACAGCGGGAAATA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
483
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
484 TTGCTTGGGGCACTTACAGAAATTTCAGATTGCGACCCTCTTTTAAAATATTATGTGGAT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
485 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
486 TTGCTTGGGGCACTTACAGAAATTTCAGATTGCGACCCTCTTTTAAAATATTATGTGGAT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
487
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
488 ACTACAACGCATGAGATTATACTTTCTTTTTTGGGGAATGTGCAGATGGAAGTCATTTGT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
489 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
490 ACTACAACGCATGAGATTATACTTTCTTTTTTGGGGAATGTGCAGATGGAAGTCATTTGT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
491
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
492 GCCATCCTTGAGGAAAAATATCATGTGGAGGCAGAAATAAAAGAGCCTACTGTTATATAT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
493 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
494 GCCATCCTTGAGGAAAAATATCATGTGGAGGCAGAAATAAAAGAGCCTACTGTTATATAT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
495
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
496 ATGGAAAGACCGCTTAGAAAAGCAGAATATACCATCCACATAGAAGTCCCGCCAAATCCT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
497 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
498 ATGGAAAGACCGCTTAGAAAAGCAGAATATACCATCCACATAGAAGTCCCGCCAAATCCT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
499
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
500 TTCTGGGCTTCTGTCGGGTTGTCCATAGAGCCGCTCCCTATTGGAAGCGGAGTGCAGTAT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
501 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
502 TTCTGGGCTTCTGTCGGGTTGTCCATAGAGCCGCTCCCTATTGGAAGCGGAGTGCAGTAT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
503
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
504 GAAAGCAGAGTTTCACTTGGATATTTAAATCAATCGTTCCAAAATGCGGTTATGGAGGGG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
505 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
506 GAAAGCAGAGTTTCACTTGGATATTTAAATCAATCGTTCCAAAATGCGGTTATGGAGGGG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
507
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
508 GTTCTTTATGGCTGCGAGCAGGGGCTGTATGGATGGAAAGTGACAGACTGTAAAATCTGT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
509 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
510 GTTCTTTATGGCTGCGAGCAGGGGCTGTATGGATGGAAAGTGACAGACTGTAAAATCTGT
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
511
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
512 TTTGAATATGGATTGTATTATAGTCCTGTAAGTACCCCCGCAGACTTTCGGCTGCTTTCC
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
513 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
514 TTTGAATATGGATTGTATTATAGTCCTGTAAGTACCCCCGCAGACTTTCGGCTGCTTTCC
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
515
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
516 CCTATCGTATTGGAGCAGGCTTTAAAAAAAGCAGGGACAGAACTATTAGAGCCATATCTC
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
517 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
518 CCTATCGTATTGGAGCAGGCTTTAAAAAAAGCAGGGACAGAACTATTAGAGCCATATCTC
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
519
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
520 CACTTTGAAATTTATGCACCGCAGGAATATCTCTCACGGGCGTATCATGATGCTCCAAGG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
521 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
522 CACTTTGAAATTTATGCACCGCAGGAATATCTCTCACGGGCGTATCATGATGCTCCAAGG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
523
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
524 TATTGTGCAGATATTGTAAGTACTCAGATAAAGAATGACGAGGTCATTCTGAAAGGAGAA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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525 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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526 TATTGTGCAGATATTGTAAGTACTCAGATAAAGAATGACGAGGTCATTCTGAAAGGAGAA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
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527
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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528 ATCCCTGCTAGATGTATTCAAGAATACAGGAACGATTTAACTTATTTCACAAATGGGCAG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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529 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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530 ATCCCTGCTAGATGTATTCAAGAATACAGGAACGATTTAACTTATTTCACAAATGGGCAG
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
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531
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
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532 GGAGTCTGCTTGACAGAGTTAAAAGGATACCAGCCAGCTATTGGTAAATTTATTTGCCAA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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533 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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534 GGAGTCTGCTTGACAGAGTTAAAAGGATACCAGCCAGCTATTGGTAAATTTATTTGCCAA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
535
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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536 CCCCGCCGCCCGAATAGCCGTATAGATAAGGTTCGGCATATGTTCCACAAGTTAGCTTAA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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537 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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diff changeset
538 CCCCGCCGCCCGAATAGCCGTATAGATAAGGTTCGGCATATGTTCCACAAGTTAGCTTAA
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
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539
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
parents:
diff changeset
540