Mercurial > repos > jpayne > refchooser
view test-data/test/resistance/UCLA_1626_resfinder/ResFinder_results_table.txt @ 0:91bc7378c1c5 draft
planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
| author | jpayne |
|---|---|
| date | Mon, 11 Aug 2025 15:37:26 +0000 |
| parents | |
| children |
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Aminoglycoside No hit found Beta-lactam Resistance gene Identity Alignment Length/Gene Length Coverage Position in reference Contig Position in contig Phenotype Accession no. blaOXA-193 99.87 774/774 100.0 1..774 Contig_17_116.474 33449..34222 Unknown Beta-lactam CP013032 blaOXA-61 99.87 774/774 100.0 1..774 Contig_17_116.474 33449..34222 Amoxicillin, Amoxicillin+Clavulanic acid, Ampicillin, Ampicillin+Clavulanic acid AY587956 blaOXA-489 99.87 774/774 100.0 1..774 Contig_17_116.474 33449..34222 Unknown Beta-lactam CP013733 blaOXA-453 99.87 774/774 100.0 1..774 Contig_17_116.474 33449..34222 Unknown Beta-lactam KR061507 blaOXA-452 99.87 774/774 100.0 1..774 Contig_17_116.474 33449..34222 Unknown Beta-lactam KR061505 blaOXA-451 99.87 774/774 100.0 1..774 Contig_17_116.474 33449..34222 Unknown Beta-lactam KR061504 blaOXA-450 99.87 774/774 100.0 1..774 Contig_17_116.474 33449..34222 Unknown Beta-lactam KR061502 Colistin No hit found Fosfomycin No hit found Fusidic Acid No hit found MLS - Macrolide, Lincosamide and Streptogramin B No hit found Misc No hit found Nitroimidazole No hit found Oxazolidinone No hit found Phenicol No hit found Fluoroquinolone No hit found Rifampicin No hit found Sulphonamide No hit found Tetracycline Resistance gene Identity Alignment Length/Gene Length Coverage Position in reference Contig Position in contig Phenotype Accession no. tet(O) 100.00 1920/1920 100.0 1..1920 Contig_1_168.009_Circ [topology=circular] 27131..29050 Doxycycline, Tetracycline, Minocycline M18896 Trimethoprim No hit found Glycopeptide No hit found Pseudomonic Acid No hit found